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LINC01619 (long intergenic non-protein coding RNA 1619)

Identity

Alias_namesC12orf79
chromosome 12 open reading frame 79
Other alias
HGNC (Hugo) LINC01619
LocusID (NCBI) 256021
Atlas_Id 78045
Location 12q21.33  [Link to chromosome band 12q21]
Location_base_pair Starts at 92378863 and ends at 92379161 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01619   27409
Cards
Entrez_Gene (NCBI)LINC01619  256021  long intergenic non-protein coding RNA 1619
AliasesC12orf79
GeneCards (Weizmann)LINC01619
Ensembl hg19 (Hinxton)ENSG00000257242 [Gene_View]  chr12:92378863-92379161 [Contig_View]  LINC01619 [Vega]
Ensembl hg38 (Hinxton)ENSG00000257242 [Gene_View]  chr12:92378863-92379161 [Contig_View]  LINC01619 [Vega]
ICGC DataPortalENSG00000257242
TCGA cBioPortalLINC01619
AceView (NCBI)LINC01619
Genatlas (Paris)LINC01619
WikiGenes256021
SOURCE (Princeton)LINC01619
Genetics Home Reference (NIH)LINC01619
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01619  -     chr12:92378863-92379161 -  12q21.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01619  -     12q21.33   [Description]    (hg38-Dec_2013)
EnsemblLINC01619 - 12q21.33 [CytoView hg19]  LINC01619 - 12q21.33 [CytoView hg38]
Mapping of homologs : NCBILINC01619 [Mapview hg19]  LINC01619 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF086029 AK055439 BC029844 BC107595 BC118985
RefSeq transcript (Entrez)NM_001256373 NM_001256374 NM_001256375
RefSeq genomic (Entrez)NC_000012 NC_018923 NT_029419 NW_004929384
Consensus coding sequences : CCDS (NCBI)LINC01619
Cluster EST : UnigeneHs.651357 [ NCBI ]
CGAP (NCI)Hs.651357
Alternative Splicing GalleryENSG00000257242
Gene ExpressionLINC01619 [ NCBI-GEO ]   LINC01619 [ EBI - ARRAY_EXPRESS ]   LINC01619 [ SEEK ]   LINC01619 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01619 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)256021
GTEX Portal (Tissue expression)LINC01619
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01619
DMDM Disease mutations256021
Blocks (Seattle)LINC01619
Human Protein AtlasENSG00000257242
Protein Interaction databases
FunCoupENSG00000257242
BioGRIDLINC01619
STRING (EMBL)LINC01619
ZODIACLINC01619
Ontologies - Pathways
Huge Navigator LINC01619 [HugePedia]
snp3D : Map Gene to Disease256021
BioCentury BCIQLINC01619
ClinGenLINC01619
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD256021
Clinical trialLINC01619
Miscellaneous
canSAR (ICR)LINC01619 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01619
EVEXLINC01619
GoPubMedLINC01619
iHOPLINC01619
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:14:27 CET 2017

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