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LINC01621 (long intergenic non-protein coding RNA 1621)

Identity

Alias_namesC6orf7
chromosome 6 open reading frame 7
Other alias
HGNC (Hugo) LINC01621
LocusID (NCBI) 89758
Atlas_Id 78159
Location 6q14.1  [Link to chromosome band 6q14]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01621   14109
Cards
Entrez_Gene (NCBI)LINC01621  89758  long intergenic non-protein coding RNA 1621
AliasesC6orf7
GeneCards (Weizmann)LINC01621
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  LINC01621 [Vega]
TCGA cBioPortalLINC01621
AceView (NCBI)LINC01621
Genatlas (Paris)LINC01621
WikiGenes89758
SOURCE (Princeton)LINC01621
Genetics Home Reference (NIH)LINC01621
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01621  -  
GoldenPath hg19 (UCSC)LINC01621  -  
EnsemblLINC01621 - [CytoView hg19]  LINC01621 - [CytoView hg38]
Mapping of homologs : NCBILINC01621 [Mapview hg19]  LINC01621 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI631615 BF115556 BX095700
RefSeq transcript (Entrez)NM_001243308
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01621
Cluster EST : UnigeneHs.288213 [ NCBI ]
CGAP (NCI)Hs.288213
Gene ExpressionLINC01621 [ NCBI-GEO ]   LINC01621 [ EBI - ARRAY_EXPRESS ]   LINC01621 [ SEEK ]   LINC01621 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01621 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)89758
GTEX Portal (Tissue expression)LINC01621
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01621
DMDM Disease mutations89758
Blocks (Seattle)LINC01621
Protein Interaction databases
BioGRIDLINC01621
STRING (EMBL)LINC01621
ZODIACLINC01621
Ontologies - Pathways
Huge Navigator LINC01621 [HugePedia]
snp3D : Map Gene to Disease89758
BioCentury BCIQLINC01621
ClinGenLINC01621
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD89758
Chemical/Pharm GKB GenePA25939
Clinical trialLINC01621
Miscellaneous
canSAR (ICR)LINC01621 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01621
EVEXLINC01621
GoPubMedLINC01621
iHOPLINC01621
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:14:23 CET 2017

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