Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01623 (long intergenic non-protein coding RNA 1623)


Alias (NCBI)-
HGNC (Hugo) LINC01623
LocusID (NCBI) 401242
Atlas_Id 77855
Location 6p22.1  [Link to chromosome band 6p22]
Location_base_pair Starts at 28859625 and ends at 28863677 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01623   52050
Entrez_Gene (NCBI)LINC01623    long intergenic non-protein coding RNA 1623
GeneCards (Weizmann)LINC01623
Ensembl hg19 (Hinxton)ENSG00000225595 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225595 [Gene_View]  ENSG00000225595 [Sequence]  chr6:28859625-28863677 [Contig_View]  LINC01623 [Vega]
ICGC DataPortalENSG00000225595
TCGA cBioPortalLINC01623
AceView (NCBI)LINC01623
Genatlas (Paris)LINC01623
SOURCE (Princeton)LINC01623
Genetics Home Reference (NIH)LINC01623
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01623  -     chr6:28859625-28863677 -  6p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01623  -     6p22.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC01623 - 6p22.1 [CytoView hg19]  LINC01623 - 6p22.1 [CytoView hg38]
genome Data Viewer NCBILINC01623 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK055503 AK291391
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NT_113891 NT_167244 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)LINC01623
Alternative Splicing GalleryENSG00000225595
Gene ExpressionLINC01623 [ NCBI-GEO ]   LINC01623 [ EBI - ARRAY_EXPRESS ]   LINC01623 [ SEEK ]   LINC01623 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01623 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01623 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401242
GTEX Portal (Tissue expression)LINC01623
Human Protein AtlasENSG00000225595-LINC01623 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01623
Blocks (Seattle)LINC01623
Human Protein Atlas [tissue]ENSG00000225595-LINC01623 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:02:52 CET 2020

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