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LINC01626 (long intergenic non-protein coding RNA 1626)

Identity

Other alias-
HGNC (Hugo) LINC01626
LocusID (NCBI) 102724000
Atlas_Id 77858
Location 6q13  [Link to chromosome band 6q13]
Location_base_pair Starts at 71421027 and ends at 71458872 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01626   52257
Cards
Entrez_Gene (NCBI)LINC01626  102724000  long intergenic non-protein coding RNA 1626
Aliases
GeneCards (Weizmann)LINC01626
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:71421027-71458872 [Contig_View]  LINC01626 [Vega]
TCGA cBioPortalLINC01626
AceView (NCBI)LINC01626
Genatlas (Paris)LINC01626
WikiGenes102724000
SOURCE (Princeton)LINC01626
Genetics Home Reference (NIH)LINC01626
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01626  -     chr6:71421027-71458872 +  6q13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01626  -     6q13   [Description]    (hg19-Feb_2009)
EnsemblLINC01626 - 6q13 [CytoView hg19]  LINC01626 - 6q13 [CytoView hg38]
Mapping of homologs : NCBILINC01626 [Mapview hg19]  LINC01626 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI269729 BX101229
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01626
Cluster EST : UnigeneHs.145785 [ NCBI ]
CGAP (NCI)Hs.145785
Gene ExpressionLINC01626 [ NCBI-GEO ]   LINC01626 [ EBI - ARRAY_EXPRESS ]   LINC01626 [ SEEK ]   LINC01626 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01626 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102724000
GTEX Portal (Tissue expression)LINC01626
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01626
DMDM Disease mutations102724000
Blocks (Seattle)LINC01626
Protein Interaction databases
BioGRIDLINC01626
STRING (EMBL)LINC01626
ZODIACLINC01626
Ontologies - Pathways
Huge Navigator LINC01626 [HugePedia]
snp3D : Map Gene to Disease102724000
BioCentury BCIQLINC01626
ClinGenLINC01626
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102724000
Clinical trialLINC01626
Miscellaneous
canSAR (ICR)LINC01626 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01626
EVEXLINC01626
GoPubMedLINC01626
iHOPLINC01626
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:55:34 CEST 2018

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