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LINC01633 (long intergenic non-protein coding RNA 1633)

Identity

Other aliasGS1-120K12.4
HGNC (Hugo) LINC01633
LocusID (NCBI) 101929069
Atlas_Id 79865
Location 1q25.3  [Link to chromosome band 1q25]
Location_base_pair Starts at 185001527 and ends at 185008678 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01633   52420
Cards
Entrez_Gene (NCBI)LINC01633  101929069  long intergenic non-protein coding RNA 1633
AliasesGS1-120K12.4
GeneCards (Weizmann)LINC01633
Ensembl hg19 (Hinxton)ENSG00000260976 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260976 [Gene_View]  chr1:185001527-185008678 [Contig_View]  LINC01633 [Vega]
ICGC DataPortalENSG00000260976
TCGA cBioPortalLINC01633
AceView (NCBI)LINC01633
Genatlas (Paris)LINC01633
WikiGenes101929069
SOURCE (Princeton)LINC01633
Genetics Home Reference (NIH)LINC01633
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01633  -     chr1:185001527-185008678 +  1q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01633  -     1q25.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01633 - 1q25.3 [CytoView hg19]  LINC01633 - 1q25.3 [CytoView hg38]
Mapping of homologs : NCBILINC01633 [Mapview hg19]  LINC01633 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF508903
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01633
Cluster EST : UnigeneHs.497170 [ NCBI ]
CGAP (NCI)Hs.497170
Alternative Splicing GalleryENSG00000260976
Gene ExpressionLINC01633 [ NCBI-GEO ]   LINC01633 [ EBI - ARRAY_EXPRESS ]   LINC01633 [ SEEK ]   LINC01633 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01633 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929069
GTEX Portal (Tissue expression)LINC01633
Human Protein AtlasENSG00000260976-LINC01633 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01633
DMDM Disease mutations101929069
Blocks (Seattle)LINC01633
Human Protein Atlas [tissue]ENSG00000260976-LINC01633 [tissue]
Protein Interaction databases
FunCoupENSG00000260976
BioGRIDLINC01633
STRING (EMBL)LINC01633
ZODIACLINC01633
Ontologies - Pathways
Huge Navigator LINC01633 [HugePedia]
snp3D : Map Gene to Disease101929069
BioCentury BCIQLINC01633
ClinGenLINC01633
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929069
Clinical trialLINC01633
Miscellaneous
canSAR (ICR)LINC01633 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01633
EVEXLINC01633
GoPubMedLINC01633
iHOPLINC01633
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:00 CET 2017

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