Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01634 (long intergenic non-protein coding RNA 1634)

Identity

Other alias-
HGNC (Hugo) LINC01634
LocusID (NCBI) 100192420
Atlas_Id 79691
Location 22q11.21  [Link to chromosome band 22q11]
Location_base_pair Starts at 18029385 and ends at 18037968 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)LINC01634   52421
Cards
Entrez_Gene (NCBI)LINC01634  100192420  long intergenic non-protein coding RNA 1634
Aliases
GeneCards (Weizmann)LINC01634
Ensembl hg19 (Hinxton)ENSG00000235295 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235295 [Gene_View]  ENSG00000235295 [Sequence]  chr22:18029385-18037968 [Contig_View]  LINC01634 [Vega]
ICGC DataPortalENSG00000235295
TCGA cBioPortalLINC01634
AceView (NCBI)LINC01634
Genatlas (Paris)LINC01634
WikiGenes100192420
SOURCE (Princeton)LINC01634
Genetics Home Reference (NIH)LINC01634
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01634  -     chr22:18029385-18037968 +  22q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01634  -     22q11.21   [Description]    (hg19-Feb_2009)
EnsemblLINC01634 - 22q11.21 [CytoView hg19]  LINC01634 - 22q11.21 [CytoView hg38]
Mapping of homologs : NCBILINC01634 [Mapview hg19]  LINC01634 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123935
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01634
Cluster EST : UnigeneHs.589947 [ NCBI ]
CGAP (NCI)Hs.589947
Alternative Splicing GalleryENSG00000235295
Gene ExpressionLINC01634 [ NCBI-GEO ]   LINC01634 [ EBI - ARRAY_EXPRESS ]   LINC01634 [ SEEK ]   LINC01634 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01634 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100192420
GTEX Portal (Tissue expression)LINC01634
Human Protein AtlasENSG00000235295-LINC01634 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01634
DMDM Disease mutations100192420
Blocks (Seattle)LINC01634
Human Protein Atlas [tissue]ENSG00000235295-LINC01634 [tissue]
Protein Interaction databases
FunCoupENSG00000235295
BioGRIDLINC01634
STRING (EMBL)LINC01634
ZODIACLINC01634
Ontologies - Pathways
Huge Navigator LINC01634 [HugePedia]
snp3D : Map Gene to Disease100192420
BioCentury BCIQLINC01634
ClinGenLINC01634
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100192420
Clinical trialLINC01634
Miscellaneous
canSAR (ICR)LINC01634 (select the gene name)
DataMed IndexLINC01634
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01634
EVEXLINC01634
GoPubMedLINC01634
iHOPLINC01634
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Feb 14 15:19:24 CET 2019
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