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LINC01635 (long intergenic non-protein coding RNA 1635)

Identity

Other alias-
HGNC (Hugo) LINC01635
LocusID (NCBI) 101928043
Atlas_Id 79050
Location 1p36.12  [Link to chromosome band 1p36]
Location_base_pair Starts at 22023994 and ends at 22026048 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01635   52422
Cards
Entrez_Gene (NCBI)LINC01635  101928043  long intergenic non-protein coding RNA 1635
Aliases
GeneCards (Weizmann)LINC01635
Ensembl hg19 (Hinxton)ENSG00000228397 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228397 [Gene_View]  chr1:22023994-22026048 [Contig_View]  LINC01635 [Vega]
ICGC DataPortalENSG00000228397
TCGA cBioPortalLINC01635
AceView (NCBI)LINC01635
Genatlas (Paris)LINC01635
WikiGenes101928043
SOURCE (Princeton)LINC01635
Genetics Home Reference (NIH)LINC01635
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01635  -     chr1:22023994-22026048 -  1p36.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01635  -     1p36.12   [Description]    (hg19-Feb_2009)
EnsemblLINC01635 - 1p36.12 [CytoView hg19]  LINC01635 - 1p36.12 [CytoView hg38]
Mapping of homologs : NCBILINC01635 [Mapview hg19]  LINC01635 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC039533
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01635
Cluster EST : UnigeneHs.617422 [ NCBI ]
CGAP (NCI)Hs.617422
Alternative Splicing GalleryENSG00000228397
Gene ExpressionLINC01635 [ NCBI-GEO ]   LINC01635 [ EBI - ARRAY_EXPRESS ]   LINC01635 [ SEEK ]   LINC01635 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01635 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928043
GTEX Portal (Tissue expression)LINC01635
Human Protein AtlasENSG00000228397-LINC01635 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01635
DMDM Disease mutations101928043
Blocks (Seattle)LINC01635
Human Protein Atlas [tissue]ENSG00000228397-LINC01635 [tissue]
Protein Interaction databases
FunCoupENSG00000228397
BioGRIDLINC01635
STRING (EMBL)LINC01635
ZODIACLINC01635
Ontologies - Pathways
Huge Navigator LINC01635 [HugePedia]
snp3D : Map Gene to Disease101928043
BioCentury BCIQLINC01635
ClinGenLINC01635
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928043
Clinical trialLINC01635
Miscellaneous
canSAR (ICR)LINC01635 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01635
EVEXLINC01635
GoPubMedLINC01635
iHOPLINC01635
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:00 CET 2017

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