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LINC01637 (long intergenic non-protein coding RNA 1637)

Identity

Other alias-
HGNC (Hugo) LINC01637
LocusID (NCBI) 101928891
Atlas_Id 79686
Location 22q11.21  [Link to chromosome band 22q11]
Location_base_pair Starts at 20957092 and ends at 20964680 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01637   52424
Cards
Entrez_Gene (NCBI)LINC01637  101928891  long intergenic non-protein coding RNA 1637
Aliases
GeneCards (Weizmann)LINC01637
Ensembl hg19 (Hinxton)ENSG00000237476 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237476 [Gene_View]  chr22:20957092-20964680 [Contig_View]  LINC01637 [Vega]
ICGC DataPortalENSG00000237476
TCGA cBioPortalLINC01637
AceView (NCBI)LINC01637
Genatlas (Paris)LINC01637
WikiGenes101928891
SOURCE (Princeton)LINC01637
Genetics Home Reference (NIH)LINC01637
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01637  -     chr22:20957092-20964680 +  22q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01637  -     22q11.21   [Description]    (hg19-Feb_2009)
EnsemblLINC01637 - 22q11.21 [CytoView hg19]  LINC01637 - 22q11.21 [CytoView hg38]
Mapping of homologs : NCBILINC01637 [Mapview hg19]  LINC01637 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA857692
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01637
Cluster EST : UnigeneHs.648264 [ NCBI ]
CGAP (NCI)Hs.648264
Alternative Splicing GalleryENSG00000237476
Gene ExpressionLINC01637 [ NCBI-GEO ]   LINC01637 [ EBI - ARRAY_EXPRESS ]   LINC01637 [ SEEK ]   LINC01637 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01637 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928891
GTEX Portal (Tissue expression)LINC01637
Human Protein AtlasENSG00000237476-LINC01637 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01637
DMDM Disease mutations101928891
Blocks (Seattle)LINC01637
Human Protein Atlas [tissue]ENSG00000237476-LINC01637 [tissue]
Protein Interaction databases
FunCoupENSG00000237476
BioGRIDLINC01637
STRING (EMBL)LINC01637
ZODIACLINC01637
Ontologies - Pathways
Huge Navigator LINC01637 [HugePedia]
snp3D : Map Gene to Disease101928891
BioCentury BCIQLINC01637
ClinGenLINC01637
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928891
Clinical trialLINC01637
Miscellaneous
canSAR (ICR)LINC01637 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01637
EVEXLINC01637
GoPubMedLINC01637
iHOPLINC01637
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:43:51 CET 2017

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