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LINC01640 (long intergenic non-protein coding RNA 1640)

Identity

Other alias-
HGNC (Hugo) LINC01640
LocusID (NCBI) 105373006
Atlas_Id 79988
Location 22q12.3  [Link to chromosome band 22q12]
Location_base_pair Starts at 33108529 and ends at 33116294 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01640   52427
Cards
Entrez_Gene (NCBI)LINC01640  105373006  long intergenic non-protein coding RNA 1640
Aliases
GeneCards (Weizmann)LINC01640
Ensembl hg19 (Hinxton)ENSG00000231253 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231253 [Gene_View]  chr22:33108529-33116294 [Contig_View]  LINC01640 [Vega]
ICGC DataPortalENSG00000231253
TCGA cBioPortalLINC01640
AceView (NCBI)LINC01640
Genatlas (Paris)LINC01640
WikiGenes105373006
SOURCE (Princeton)LINC01640
Genetics Home Reference (NIH)LINC01640
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01640  -     chr22:33108529-33116294 +  22q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01640  -     22q12.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01640 - 22q12.3 [CytoView hg19]  LINC01640 - 22q12.3 [CytoView hg38]
Mapping of homologs : NCBILINC01640 [Mapview hg19]  LINC01640 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB089380
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01640
Cluster EST : UnigeneHs.637171 [ NCBI ]
CGAP (NCI)Hs.637171
Alternative Splicing GalleryENSG00000231253
Gene ExpressionLINC01640 [ NCBI-GEO ]   LINC01640 [ EBI - ARRAY_EXPRESS ]   LINC01640 [ SEEK ]   LINC01640 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01640 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105373006
GTEX Portal (Tissue expression)LINC01640
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01640
DMDM Disease mutations105373006
Blocks (Seattle)LINC01640
Human Protein AtlasENSG00000231253
Protein Interaction databases
FunCoupENSG00000231253
BioGRIDLINC01640
STRING (EMBL)LINC01640
ZODIACLINC01640
Ontologies - Pathways
Huge Navigator LINC01640 [HugePedia]
snp3D : Map Gene to Disease105373006
BioCentury BCIQLINC01640
ClinGenLINC01640
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105373006
Clinical trialLINC01640
Miscellaneous
canSAR (ICR)LINC01640 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01640
EVEXLINC01640
GoPubMedLINC01640
iHOPLINC01640
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:15:00 CEST 2017

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