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LINC01655 (long intergenic non-protein coding RNA 1655)

Identity

Other alias-
HGNC (Hugo) LINC01655
LocusID (NCBI) 101929771
Atlas_Id 79182
Location 1q41  [Link to chromosome band 1q41]
Location_base_pair Starts at 221827666 and ends at 221840666 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01655   52443
Cards
Entrez_Gene (NCBI)LINC01655  101929771  long intergenic non-protein coding RNA 1655
Aliases
GeneCards (Weizmann)LINC01655
Ensembl hg19 (Hinxton)ENSG00000227925 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227925 [Gene_View]  chr1:221827666-221840666 [Contig_View]  LINC01655 [Vega]
ICGC DataPortalENSG00000227925
TCGA cBioPortalLINC01655
AceView (NCBI)LINC01655
Genatlas (Paris)LINC01655
WikiGenes101929771
SOURCE (Princeton)LINC01655
Genetics Home Reference (NIH)LINC01655
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01655  -     chr1:221827666-221840666 -  1q41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01655  -     1q41   [Description]    (hg19-Feb_2009)
EnsemblLINC01655 - 1q41 [CytoView hg19]  LINC01655 - 1q41 [CytoView hg38]
Mapping of homologs : NCBILINC01655 [Mapview hg19]  LINC01655 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA782022
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01655
Cluster EST : UnigeneHs.557001 [ NCBI ]
CGAP (NCI)Hs.557001
Alternative Splicing GalleryENSG00000227925
Gene ExpressionLINC01655 [ NCBI-GEO ]   LINC01655 [ EBI - ARRAY_EXPRESS ]   LINC01655 [ SEEK ]   LINC01655 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01655 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929771
GTEX Portal (Tissue expression)LINC01655
Human Protein AtlasENSG00000227925-LINC01655 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01655
DMDM Disease mutations101929771
Blocks (Seattle)LINC01655
Human Protein Atlas [tissue]ENSG00000227925-LINC01655 [tissue]
Protein Interaction databases
FunCoupENSG00000227925
BioGRIDLINC01655
STRING (EMBL)LINC01655
ZODIACLINC01655
Ontologie{ - PetHways
Huge Navigator LINC01655 [HugePedia]
snp3D : Map Gene to Disease101929771
BioCentury BCIQLINC01655
ClinGenLINC01655
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929771
Clinical trialLINC01655
Miscellaneous
canSAR (ICR)LINC01655 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01655
EVEXLINC01655
GoPubMedLINC01655
iHOPLINC01655
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:39:45 CET 2017

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