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LINC01656 (long intergenic non-protein coding RNA 1656)

Identity

Other alias-
HGNC (Hugo) LINC01656
LocusID (NCBI) 101927526
Atlas_Id 79049
Location 22q13.31  [Link to chromosome band 22q13]
Location_base_pair Starts at 44443327 and ends at 44444788 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01656   52444
Cards
Entrez_Gene (NCBI)LINC01656  101927526  long intergenic non-protein coding RNA 1656
Aliases
GeneCards (Weizmann)LINC01656
Ensembl hg19 (Hinxton)ENSG00000232655 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232655 [Gene_View]  chr22:44443327-44444788 [Contig_View]  LINC01656 [Vega]
ICGC DataPortalENSG00000232655
TCGA cBioPortalLINC01656
AceView (NCBI)LINC01656
Genatlas (Paris)LINC01656
WikiGenes101927526
SOURCE (Princeton)LINC01656
Genetics Home Reference (NIH)LINC01656
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01656  -     chr22:44443327-44444788 +  22q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01656  -     22q13.31   [Description]    (hg19-Feb_2009)
EnsemblLINC01656 - 22q13.31 [CytoView hg19]  LINC01656 - 22q13.31 [CytoView hg38]
Mapping of homologs : NCBILINC01656 [Mapview hg19]  LINC01656 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC035864
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01656
Cluster EST : UnigeneHs.339290 [ NCBI ]
CGAP (NCI)Hs.339290
Alternative Splicing GalleryENSG00000232655
Gene ExpressionLINC01656 [ NCBI-GEO ]   LINC01656 [ EBI - ARRAY_EXPRESS ]   LINC01656 [ SEEK ]   LINC01656 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01656 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927526
GTEX Portal (Tissue expression)LINC01656
Human Protein AtlasENSG00000232655-LINC01656 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01656
DMDM Disease mutations101927526
Blocks (Seattle)LINC01656
Human Protein Atlas [tissue]ENSG00000232655-LINC01656 [tissue]
Protein Interaction databases
FunCoupENSG00000232655
BioGRIDLINC01656
STRING (EMBL)LINC01656
ZODIACLINC01656
Ontologies - Pathways
Huge Navigator LINC01656 [HugePedia]
snp3D : Map Gene to Disease101927526
BioCentury BCIQLINC01656
ClinGenLINC01656
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927526
Clinical trialLINC01656
Miscellaneous
canSAR (ICR)LINC01656 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01656
EVEXLINC01656
GoPubMedLINC01656
iHOPLINC01656
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:43:52 CET 2017

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