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LINC01664 (long intergenic non-protein coding RNA 1664)

Identity

Other alias-
HGNC (Hugo) LINC01664
LocusID (NCBI) 100996342
Atlas_Id 79434
Location 22q11.1  [Link to chromosome band 22q11]
Location_base_pair Starts at 17121595 and ends at 17132104 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01664   52452
Cards
Entrez_Gene (NCBI)LINC01664  100996342  long intergenic non-protein coding RNA 1664
Aliases
GeneCards (Weizmann)LINC01664
Ensembl hg19 (Hinxton)ENSG00000235478 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235478 [Gene_View]  chr22:17121595-17132104 [Contig_View]  LINC01664 [Vega]
ICGC DataPortalENSG00000235478
TCGA cBioPortalLINC01664
AceView (NCBI)LINC01664
Genatlas (Paris)LINC01664
WikiGenes100996342
SOURCE (Princeton)LINC01664
Genetics Home Reference (NIH)LINC01664
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01664  -     chr22:17121595-17132104 +  22q11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01664  -     22q11.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01664 - 22q11.1 [CytoView hg19]  LINC01664 - 22q11.1 [CytoView hg38]
Mapping of homologs : NCBILINC01664 [Mapview hg19]  LINC01664 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC021738
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01664
Cluster EST : UnigeneHs.714550 [ NCBI ]
CGAP (NCI)Hs.714550
Alternative Splicing GalleryENSG00000235478
Gene ExpressionLINC01664 [ NCBI-GEO ]   LINC01664 [ EBI - ARRAY_EXPRESS ]   LINC01664 [ SEEK ]   LINC01664 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01664 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100996342
GTEX Portal (Tissue expression)LINC01664
Human Protein AtlasENSG00000235478-LINC01664 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01664
DMDM Disease mutations100996342
Blocks (Seattle)LINC01664
Human Protein Atlas [tissue]ENSG00000235478-LINC01664 [tissue]
Protein Interaction databases
FunCoupENSG00000235478
BioGRIDLINC01664
STRING (EMBL)LINC01664
ZODIACLINC01664
Ontologies - Pathways
Huge Navigator LINC01664 [HugePedia]
snp3D : Map Gene to Disease100996342
BioCentury BCIQLINC01664
ClinGenLINC01664
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100996342
Clinical trialLINC01664
Miscellaneous
canSAR (ICR)LINC01664 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01664
EVEXLINC01664
GoPubMedLINC01664
iHOPLINC01664
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:43:54 CET 2017

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