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LINC01667 (long intergenic non-protein coding RNA 1667)

Identity

Other alias-
HGNC (Hugo) LINC01667
LocusID (NCBI) 441058
Atlas_Id 79448
Location 21p11.2  [Link to chromosome band 21p11]
Location_base_pair Starts at 9781849 and ends at 9821061 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01667   52455
Cards
Entrez_Gene (NCBI)LINC01667  441058  long intergenic non-protein coding RNA 1667
Aliases
GeneCards (Weizmann)LINC01667
Ensembl hg19 (Hinxton)ENSG00000280081 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000280081 [Gene_View]  chr21:9781849-9821061 [Contig_View]  LINC01667 [Vega]
ICGC DataPortalENSG00000280081
TCGA cBioPortalLINC01667
AceView (NCBI)LINC01667
Genatlas (Paris)LINC01667
WikiGenes441058
SOURCE (Princeton)LINC01667
Genetics Home Reference (NIH)LINC01667
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01667  -     chr21:9781849-9821061 -  21p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01667  -     21p11.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01667 - 21p11.2 [CytoView hg19]  LINC01667 - 21p11.2 [CytoView hg38]
Mapping of homologs : NCBILINC01667 [Mapview hg19]  LINC01667 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW303457 BC029568
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01667
Cluster EST : UnigeneHs.130535 [ NCBI ]
CGAP (NCI)Hs.130535
Alternative Splicing GalleryENSG00000280081
Gene ExpressionLINC01667 [ NCBI-GEO ]   LINC01667 [ EBI - ARRAY_EXPRESS ]   LINC01667 [ SEEK ]   LINC01667 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01667 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)441058
GTEX Portal (Tissue expression)LINC01667
Human Protein AtlasENSG00000280081-LINC01667 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01667
DMDM Disease mutations441058
Blocks (Seattle)LINC01667
Human Protein Atlas [tissue]ENSG00000280081-LINC01667 [tissue]
IPIIPI00386017   IPI00744500   
Protein Interaction databases
FunCoupENSG00000280081
BioGRIDLINC01667
STRING (EMBL)LINC01667
ZODIACLINC01667
Ontologies - Pathways
Huge Navigator LINC01667 [HugePedia]
snp3D : Map Gene to Disease441058
BioCentury BCIQLINC01667
ClinGenLINC01667
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441058
Clinical trialLINC01667
Miscellaneous
canSAR (ICR)LINC01667 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01667
EVEXLINC01667
GoPubMedLINC01667
iHOPLINC01667
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:43:00 CET 2017

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