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LINC01676 (long intergenic non-protein coding RNA 1676)

Identity

Other alias-
HGNC (Hugo) LINC01676
LocusID (NCBI) 101928476
Atlas_Id 79299
Location 1p21.1  [Link to chromosome band 1p21]
Location_base_pair Starts at 105602152 and ends at 105618935 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01676   52464
Cards
Entrez_Gene (NCBI)LINC01676  101928476  long intergenic non-protein coding RNA 1676
Aliases
GeneCards (Weizmann)LINC01676
Ensembl hg19 (Hinxton)ENSG00000230768 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230768 [Gene_View]  chr1:105602152-105618935 [Contig_View]  LINC01676 [Vega]
ICGC DataPortalENSG00000230768
TCGA cBioPortalLINC01676
AceView (NCBI)LINC01676
Genatlas (Paris)LINC01676
WikiGenes101928476
SOURCE (Princeton)LINC01676
Genetics Home Reference (NIH)LINC01676
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01676  -     chr1:105602152-105618935 -  1p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01676  -     1p21.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01676 - 1p21.1 [CytoView hg19]  LINC01676 - 1p21.1 [CytoView hg38]
Mapping of homologs : NCBILINC01676 [Mapview hg19]  LINC01676 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043293
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01676
Cluster EST : UnigeneHs.563856 [ NCBI ]
CGAP (NCI)Hs.563856
Alternative Splicing GalleryENSG00000230768
Gene ExpressionLINC01676 [ NCBI-GEO ]   LINC01676 [ EBI - ARRAY_EXPRESS ]   LINC01676 [ SEEK ]   LINC01676 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01676 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928476
GTEX Portal (Tissue expression)LINC01676
Human Protein AtlasENSG00000230768-LINC01676 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01676
DMDM Disease mutations101928476
Blocks (Seattle)LINC01676
Human Protein Atlas [tissue]ENSG00000230768-LINC01676 [tissue]
Protein Interaction databases
FunCoupENSG00000230768
BioGRIDLINC01676
STRING (EMBL)LINC01676
ZODIACLINC01676
Ontologies - Pathways
Huge Navigator LINC01676 [HugePedia]
snp3D : Map Gene to Disease101928476
BioCentury BCIQLINC01676
ClinGenLINC01676
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928476
Clinical trialLINC01676
Miscellaneous
canSAR (ICR)LINC01676 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01676
EVEXLINC01676
GoPubMedLINC01676
iHOPLINC01676
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:03 CET 2017

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