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LINC01678 (long intergenic non-protein coding RNA 1678)

Identity

Other alias-
HGNC (Hugo) LINC01678
LocusID (NCBI) 105377138
Atlas_Id 79968
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 44158773 and ends at 44159862 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01678   52466
Cards
Entrez_Gene (NCBI)LINC01678  105377138  long intergenic non-protein coding RNA 1678
Aliases
GeneCards (Weizmann)LINC01678
Ensembl hg19 (Hinxton)ENSG00000225331 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225331 [Gene_View]  chr21:44158773-44159862 [Contig_View]  LINC01678 [Vega]
ICGC DataPortalENSG00000225331
TCGA cBioPortalLINC01678
AceView (NCBI)LINC01678
Genatlas (Paris)LINC01678
WikiGenes105377138
SOURCE (Princeton)LINC01678
Genetics Home Reference (NIH)LINC01678
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01678  -     chr21:44158773-44159862 -  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01678  -     21q22.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01678 - 21q22.3 [CytoView hg19]  LINC01678 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBILINC01678 [Mapview hg19]  LINC01678 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01678
Alternative Splicing GalleryENSG00000225331
Gene ExpressionLINC01678 [ NCBI-GEO ]   LINC01678 [ EBI - ARRAY_EXPRESS ]   LINC01678 [ SEEK ]   LINC01678 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01678 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105377138
GTEX Portal (Tissue expression)LINC01678
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01678
DMDM Disease mutations105377138
Blocks (Seattle)LINC01678
Human Protein AtlasENSG00000225331
Protein Interaction databases
FunCoupENSG00000225331
BioGRIDLINC01678
STRING (EMBL)LINC01678
ZODIACLINC01678
Ontologies - Pathways
Huge Navigator LINC01678 [HugePedia]
snp3D : Map Gene to Disease105377138
BioCentury BCIQLINC01678
ClinGenLINC01678
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105377138
Clinical trialLINC01678
Miscellaneous
canSAR (ICR)LINC01678 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01678
EVEXLINC01678
GoPubMedLINC01678
iHOPLINC01678
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:15:04 CEST 2017

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