Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01679 (long intergenic non-protein coding RNA 1679)


Alias (NCBI)TCONS_00029157
HGNC (Hugo) LINC01679
LocusID (NCBI) 101928399
Atlas_Id 79530
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 43358055 and ends at 43362349 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01679   52469
Entrez_Gene (NCBI)LINC01679    long intergenic non-protein coding RNA 1679
GeneCards (Weizmann)LINC01679
Ensembl hg19 (Hinxton)ENSG00000237989 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237989 [Gene_View]  ENSG00000237989 [Sequence]  chr21:43358055-43362349 [Contig_View]  LINC01679 [Vega]
ICGC DataPortalENSG00000237989
TCGA cBioPortalLINC01679
AceView (NCBI)LINC01679
Genatlas (Paris)LINC01679
SOURCE (Princeton)LINC01679
Genetics Home Reference (NIH)LINC01679
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01679  -     chr21:43358055-43362349 -  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01679  -     21q22.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC01679 - 21q22.3 [CytoView hg19]  LINC01679 - 21q22.3 [CytoView hg38]
Genome Data Viewer NCBILINC01679 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AL530227 BU736390 BX390224
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01679
Gene ExpressionLINC01679 [ NCBI-GEO ]   LINC01679 [ EBI - ARRAY_EXPRESS ]   LINC01679 [ SEEK ]   LINC01679 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01679 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01679 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101928399
GTEX Portal (Tissue expression)LINC01679
Human Protein AtlasENSG00000237989-LINC01679 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01679
Human Protein Atlas [tissue]ENSG00000237989-LINC01679 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:58:27 CEST 2021

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