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LINC01679 (long intergenic non-protein coding RNA 1679)

Identity

Other aliasTCONS_00029157
HGNC (Hugo) LINC01679
LocusID (NCBI) 101928399
Atlas_Id 79530
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 43358055 and ends at 43362349 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01679   52469
Cards
Entrez_Gene (NCBI)LINC01679  101928399  long intergenic non-protein coding RNA 1679
AliasesTCONS_00029157
GeneCards (Weizmann)LINC01679
Ensembl hg19 (Hinxton)ENSG00000237989 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237989 [Gene_View]  chr21:43358055-43362349 [Contig_View]  LINC01679 [Vega]
ICGC DataPortalENSG00000237989
TCGA cBioPortalLINC01679
AceView (NCBI)LINC01679
Genatlas (Paris)LINC01679
WikiGenes101928399
SOURCE (Princeton)LINC01679
Genetics Home Reference (NIH)LINC01679
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01679  -     chr21:43358055-43362349 -  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01679  -     21q22.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01679 - 21q22.3 [CytoView hg19]  LINC01679 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBILINC01679 [Mapview hg19]  LINC01679 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL530227 BU736390 BX390224
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01679
Cluster EST : UnigeneHs.517319 [ NCBI ]
CGAP (NCI)Hs.517319
Alternative Splicing GalleryENSG00000237989
Gene ExpressionLINC01679 [ NCBI-GEO ]   LINC01679 [ EBI - ARRAY_EXPRESS ]   LINC01679 [ SEEK ]   LINC01679 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01679 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928399
GTEX Portal (Tissue expression)LINC01679
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01679
DMDM Disease mutations101928399
Blocks (Seattle)LINC01679
Human Protein AtlasENSG00000237989
Protein Interaction databases
FunCoupENSG00000237989
BioGRIDLINC01679
STRING (EMBL)LINC01679
ZODIACLINC01679
Ontologies - Pathways
Huge Navigator LINC01679 [HugePedia]
snp3D : Map Gene to Disease101928399
BioCentury BCIQLINC01679
ClinGenLINC01679
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928399
Clinical trialLINC01679
Miscellaneous
canSAR (ICR)LINC01679 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01679
EVEXLINC01679
GoPubMedLINC01679
iHOPLINC01679
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:15:04 CEST 2017

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