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LINC01681 (long intergenic non-protein coding RNA 1681)

Identity

Other alias-
HGNC (Hugo) LINC01681
LocusID (NCBI) 105371609
Atlas_Id 79037
Location 1q24.2  [Link to chromosome band 1q24]
Location_base_pair Starts at 170174379 and ends at 170241570 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

GeneCards (Weizmann)
Nomenclature
HGNC (Hugo)LINC01681   52468
Cards
Entrez_Gene (NCBI)LINC01681  105371609  long intergenic non-protein coding RNA 1681
AliasesLINC01681
Ensembl hg19 (Hinxton)ENSG00000233985 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233985 [Gene_View]  chr1:170174379-170241570 [Contig_View]  LINC01681 [Vega]
ICGC DataPortalENSG00000233985
TCGA cBioPortalLINC01681
AceView (NCBI)LINC01681
Genatlas (Paris)LINC01681
WikiGenes105371609
SOURCE (Princeton)LINC01681
Genetics Home Reference (NIH)LINC01681
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01681  -     chr1:170174379-170241570 +  1q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01681  -     1q24.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01681 - 1q24.2 [CytoView hg19]  LINC01681 - 1q24.2 [CytoView hg38]
Mapping of homologs : NCBILINC01681 [Mapview hg19]  LINC01681 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CB992355 DB088181 DB337647
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01681
Cluster EST : UnigeneHs.508115 [ NCBI ]
CGAP (NCI)Hs.508115
Alternative Splicing GalleryENSG00000233985
Gene ExpressionLINC01681 [ NCBI-GEO ]   LINC01681 [ EBI - ARRAY_EXPRESS ]   LINC01681 [ SEEK ]   LINC01681 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01681 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105371609
GTEX Portal (Tissue expression)LINC01681
Human Protein AtlasENSG00000233985-LINC01681 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01681
DMDM Disease mutations105371609
Blocks (Seattle)LINC01681
Human Protein Atlas [tissue]ENSG00000233985-LINC01681 [tissue]
Protein Interaction databases
FunCoupENSG00000233985
BioGRIDLINC01681
STRING (EMBL)LINC01681
ZODIACLINC01681
Ontologies - Pathways
Huge Navigator LINC01681 [HugePedia]
snp3D : Map Gene to Disease105371609
BioCentury BCIQLINC01681
ClinGenLINC01681
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105371609
Clinical trialLINC01681
Miscellaneous
canSAR (ICR)LINC01681 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01681
EVEXLINC01681
GoPubMedLINC01681
iHOPLINC01681
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:04 CET 2017

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