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LINC01683 (long intergenic non-protein coding RNA 1683)

Identity

Other aliasC21orf40
HGNC (Hugo) LINC01683
LocusID (NCBI) 105372746
Atlas_Id 79806
Location 21q21.1  [Link to chromosome band 21q21]
Location_base_pair Starts at 19893279 and ends at 19899755 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01683   52471
Cards
Entrez_Gene (NCBI)LINC01683  105372746  long intergenic non-protein coding RNA 1683
AliasesC21orf40
GeneCards (Weizmann)LINC01683
Ensembl hg19 (Hinxton)ENSG00000233480 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233480 [Gene_View]  chr21:19893279-19899755 [Contig_View]  LINC01683 [Vega]
ICGC DataPortalENSG00000233480
TCGA cBioPortalLINC01683
AceView (NCBI)LINC01683
Genatlas (Paris)LINC01683
WikiGenes105372746
SOURCE (Princeton)LINC01683
Genetics Home Reference (NIH)LINC01683
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01683  -     chr21:19893279-19899755 -  21q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01683  -     21q21.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01683 - 21q21.1 [CytoView hg19]  LINC01683 - 21q21.1 [CytoView hg38]
Mapping of homologs : NCBILINC01683 [Mapview hg19]  LINC01683 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA412132
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01683
Cluster EST : UnigeneHs.580899 [ NCBI ]
CGAP (NCI)Hs.580899
Alternative Splicing GalleryENSG00000233480
Gene ExpressionLINC01683 [ NCBI-GEO ]   LINC01683 [ EBI - ARRAY_EXPRESS ]   LINC01683 [ SEEK ]   LINC01683 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01683 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105372746
GTEX Portal (Tissue expression)LINC01683
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01683
DMDM Disease mutations105372746
Blocks (Seattle)LINC01683
Human Protein AtlasENSG00000233480
Protein Interaction databases
FunCoupENSG00000233480
BioGRIDLINC01683
STRING (EMBL)LINC01683
ZODIACLINC01683
Ontologies - Pathways
Huge Navigator LINC01683 [HugePedia]
snp3D : Map Gene to Disease105372746
BioCentury BCIQLINC01683
ClinGenLINC01683
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105372746
Clinical trialLINC01683
Miscellaneous
canSAR (ICR)LINC01683 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01683
EVEXLINC01683
GoPubMedLINC01683
iHOPLINC01683
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:15:05 CEST 2017

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