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LINC01686 (long intergenic non-protein coding RNA 1686)

Identity

Other alias-
HGNC (Hugo) LINC01686
LocusID (NCBI) 284648
Atlas_Id 79833
Location 1q25.3  [Link to chromosome band 1q25]
Location_base_pair Starts at 182615140 and ends at 182616633 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01686   27643
Cards
Entrez_Gene (NCBI)LINC01686  284648  long intergenic non-protein coding RNA 1686
Aliases
GeneCards (Weizmann)LINC01686
Ensembl hg19 (Hinxton)ENSG00000261504 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000261504 [Gene_View]  chr1:182615140-182616633 [Contig_View]  LINC01686 [Vega]
ICGC DataPortalENSG00000261504
TCGA cBioPortalLINC01686
AceView (NCBI)LINC01686
Genatlas (Paris)LINC01686
WikiGenes284648
SOURCE (Princeton)LINC01686
Genetics Home Reference (NIH)LINC01686
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01686  -     chr1:182615140-182616633 +  1q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01686  -     1q25.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01686 - 1q25.3 [CytoView hg19]  LINC01686 - 1q25.3 [CytoView hg38]
Mapping of homologs : NCBILINC01686 [Mapview hg19]  LINC01686 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW297673 BC034591
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01686
Cluster EST : UnigeneHs.253475 [ NCBI ]
CGAP (NCI)Hs.253475
Alternative Splicing GalleryENSG00000261504
Gene ExpressionLINC01686 [ NCBI-GEO ]   LINC01686 [ EBI - ARRAY_EXPRESS ]   LINC01686 [ SEEK ]   LINC01686 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01686 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)284648
GTEX Portal (Tissue expression)LINC01686
Human Protein AtlasENSG00000261504-LINC01686 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01686
DMDM Disease mutations284648
Blocks (Seattle)LINC01686
Human Protein Atlas [tissue]ENSG00000261504-LINC01686 [tissue]
Protein Interaction databases
FunCoupENSG00000261504
BioGRIDLINC01686
STRING (EMBL)LINC01686
ZODIACLINC01686
Ontologies - Pathways
Huge Navigator LINC01686 [HugePedia]
snp3D : Map Gene to Disease284648
BioCentury BCIQLINC01686
ClinGenLINC01686
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284648
Clinical trialLINC01686
Miscellaneous
canSAR (ICR)LINC01686 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01686
EVEXLINC01686
GoPubMedLINC01686
iHOPLINC01686
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:39:52 CET 2017

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