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LINC01687 (long intergenic non-protein coding RNA 1687)

Identity

Other alias-
HGNC (Hugo) LINC01687
LocusID (NCBI) 101927843
Atlas_Id 78886
Location 21q21.1  [Link to chromosome band 21q21]
Location_base_pair Starts at 22009158 and ends at 22098459 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01687   52474
Cards
Entrez_Gene (NCBI)LINC01687  101927843  long intergenic non-protein coding RNA 1687
Aliases
GeneCards (Weizmann)LINC01687
Ensembl hg19 (Hinxton)ENSG00000233215 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233215 [Gene_View]  chr21:22009158-22098459 [Contig_View]  LINC01687 [Vega]
ICGC DataPortalENSG00000233215
TCGA cBioPortalLINC01687
AceView (NCBI)LINC01687
Genatlas (Paris)LINC01687
WikiGenes101927843
SOURCE (Princeton)LINC01687
Genetics Home Reference (NIH)LINC01687
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01687  -     chr21:22009158-22098459 -  21q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01687  -     21q21.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01687 - 21q21.1 [CytoView hg19]  LINC01687 - 21q21.1 [CytoView hg38]
Mapping of homologs : NCBILINC01687 [Mapview hg19]  LINC01687 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC039377
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01687
Cluster EST : UnigeneHs.652879 [ NCBI ]
CGAP (NCI)Hs.652879
Alternative Splicing GalleryENSG00000233215
Gene ExpressionLINC01687 [ NCBI-GEO ]   LINC01687 [ EBI - ARRAY_EXPRESS ]   LINC01687 [ SEEK ]   LINC01687 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01687 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927843
GTEX Portal (Tissue expression)LINC01687
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01687
DMDM Disease mutations101927843
Blocks (Seattle)LINC01687
Human Protein AtlasENSG00000233215
Protein Interaction databases
FunCoupENSG00000233215
BioGRIDLINC01687
STRING (EMBL)LINC01687
ZODIACLINC01687
Ontologies - Pathways
Huge Navigator LINC01687 [HugePedia]
snp3D : Map Gene to Disease101927843
BioCentury BCIQLINC01687
ClinGenLINC01687
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927843
Clinical trialLINC01687
Miscellaneous
canSAR (ICR)LINC01687 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01687
EVEXLINC01687
GoPubMedLINC01687
iHOPLINC01687
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:15:05 CEST 2017

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