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LINC01693 (long intergenic non-protein coding RNA 1693)

Identity

Other alias-
HGNC (Hugo) LINC01693
LocusID (NCBI) 105748977
Atlas_Id 79178
Location 1q32.3  [Link to chromosome band 1q32]
Location_base_pair Starts at 211639808 and ends at 211654621 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01693   52478
Cards
Entrez_Gene (NCBI)LINC01693  105748977  long intergenic non-protein coding RNA 1693
Aliases
GeneCards (Weizmann)LINC01693
Ensembl hg19 (Hinxton)ENSG00000227764 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227764 [Gene_View]  chr1:211639808-211654621 [Contig_View]  LINC01693 [Vega]
ICGC DataPortalENSG00000227764
TCGA cBioPortalLINC01693
AceView (NCBI)LINC01693
Genatlas (Paris)LINC01693
WikiGenes105748977
SOURCE (Princeton)LINC01693
Genetics Home Reference (NIH)LINC01693
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01693  -     chr1:211639808-211654621 +  1q32.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01693  -     1q32.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01693 - 1q32.3 [CytoView hg19]  LINC01693 - 1q32.3 [CytoView hg38]
Mapping of homologs : NCBILINC01693 [Mapview hg19]  LINC01693 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BF726452 BF726453
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01693
Cluster EST : UnigeneHs.553186 [ NCBI ]
CGAP (NCI)Hs.553186
Alternative Splicing GalleryENSG00000227764
Gene ExpressionLINC01693 [ NCBI-GEO ]   LINC01693 [ EBI - ARRAY_EXPRESS ]   LINC01693 [ SEEK ]   LINC01693 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01693 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105748977
GTEX Portal (Tissue expression)LINC01693
Human Protein AtlasENSG00000227764-LINC01693 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01693
DMDM Disease mutations105748977
Blocks (Seattle)LINC01693
Human Protein Atlas [tissue]ENSG00000227764-LINC01693 [tissue]
Protein Interaction databases
FunCoupENSG00000227764
BioGRIDLINC01693
STRING (EMBL)LINC01693
ZODIACLINC01693
Ontologies - Pathways
Huge Navigator LINC01693 [HugePedia]
snp3D : Map Gene to Disease105748977
BioCentury BCIQLINC01693
ClinGenLINC01693
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105748977
Clinical trialLINC01693
Miscellaneous
canSAR (ICR)LINC01693 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01693
EVEXLINC01693
GoPubMedLINC01693
iHOPLINC01693
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:05 CET 2017

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