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LINC01699 (long intergenic non-protein coding RNA 1699)

Identity

Alias_symbol (synonym)GM140
Other alias
HGNC (Hugo) LINC01699
LocusID (NCBI) 100287948
Atlas_Id 79381
Location 1q25.3  [Link to chromosome band 1q25]
Location_base_pair Starts at 181236388 and ends at 181238604 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01699   52487
Cards
Entrez_Gene (NCBI)LINC01699  100287948  long intergenic non-protein coding RNA 1699
AliasesGM140
GeneCards (Weizmann)LINC01699
Ensembl hg19 (Hinxton)ENSG00000179452 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000179452 [Gene_View]  chr1:181236388-181238604 [Contig_View]  LINC01699 [Vega]
ICGC DataPortalENSG00000179452
TCGA cBioPortalLINC01699
AceView (NCBI)LINC01699
Genatlas (Paris)LINC01699
WikiGenes100287948
SOURCE (Princeton)LINC01699
Genetics Home Reference (NIH)LINC01699
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01699  -     chr1:181236388-181238604 +  1q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01699  -     1q25.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01699 - 1q25.3 [CytoView hg19]  LINC01699 - 1q25.3 [CytoView hg38]
Mapping of homologs : NCBILINC01699 [Mapview hg19]  LINC01699 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF387616
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01699
Cluster EST : UnigeneHs.742594 [ NCBI ]
CGAP (NCI)Hs.742594
Alternative Splicing GalleryENSG00000179452
Gene ExpressionLINC01699 [ NCBI-GEO ]   LINC01699 [ EBI - ARRAY_EXPRESS ]   LINC01699 [ SEEK ]   LINC01699 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01699 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287948
GTEX Portal (Tissue expression)LINC01699
Human Protein AtlasENSG00000179452-LINC01699 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01699
DMDM Disease mutations100287948
Blocks (Seattle)LINC01699
Human Protein Atlas [tissue]ENSG00000179452-LINC01699 [tissue]
IPIIPI00178866   
Protein Interaction databases
FunCoupENSG00000179452
BioGRIDLINC01699
STRING (EMBL)LINC01699
ZODIACLINC01699
Ontologies - Pathways
Huge Navigator LINC01699 [HugePedia]
snp3D : Map Gene to Disease100287948
BioCentury BCIQLINC01699
ClinGenLINC01699
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287948
Clinical trialLINC01699
Miscellaneous
canSAR (ICR)LINC01699 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01699
EVEXLINC01699
GoPubMedLINC01699
iHOPLINC01699
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:06 CET 2017

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