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LINC01700 (long intergenic non-protein coding RNA 1700)

Identity

Other alias-
HGNC (Hugo) LINC01700
LocusID (NCBI) 101928435
Atlas_Id 79557
Location 21q22.2  [Link to chromosome band 21q22]
Location_base_pair Starts at 38974429 and ends at 38977774 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01700   52488
Cards
Entrez_Gene (NCBI)LINC01700  101928435  long intergenic non-protein coding RNA 1700
Aliases
GeneCards (Weizmann)LINC01700
Ensembl hg19 (Hinxton)ENSG00000232837 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232837 [Gene_View]  chr21:38974429-38977774 [Contig_View]  LINC01700 [Vega]
ICGC DataPortalENSG00000232837
TCGA cBioPortalLINC01700
AceView (NCBI)LINC01700
Genatlas (Paris)LINC01700
WikiGenes101928435
SOURCE (Princeton)LINC01700
Genetics Home Reference (NIH)LINC01700
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01700  -     chr21:38974429-38977774 -  21q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01700  -     21q22.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01700 - 21q22.2 [CytoView hg19]  LINC01700 - 21q22.2 [CytoView hg38]
Mapping of homologs : NCBILINC01700 [Mapview hg19]  LINC01700 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC034606
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01700
Cluster EST : UnigeneHs.385528 [ NCBI ]
CGAP (NCI)Hs.385528
Alternative Splicing GalleryENSG00000232837
Gene ExpressionLINC01700 [ NCBI-GEO ]   LINC01700 [ EBI - ARRAY_EXPRESS ]   LINC01700 [ SEEK ]   LINC01700 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01700 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928435
GTEX Portal (Tissue expression)LINC01700
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01700
DMDM Disease mutations101928435
Blocks (Seattle)LINC01700
Human Protein AtlasENSG00000232837
Protein Interaction databases
FunCoupENSG00000232837
BioGRIDLINC01700
STRING (EMBL)LINC01700
ZODIACLINC01700
Ontologies - Pathways
Huge Navigator LINC01700 [HugePedia]
snp3D : Map Gene to Disease101928435
BioCentury BCIQLINC01700
ClinGenLINC01700
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928435
Clinical trialLINC01700
Miscellaneous
canSAR (ICR)LINC01700 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01700
EVEXLINC01700
GoPubMedLINC01700
iHOPLINC01700
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:15:07 CEST 2017

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