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LINC01704 (long intergenic non-protein coding RNA 1704)

Identity

Other alias-
HGNC (Hugo) LINC01704
LocusID (NCBI) 646268
Atlas_Id 80107
Location 1q23.1  [Link to chromosome band 1q23]
Location_base_pair Starts at 158132044 and ends at 158140640 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01704   52492
Cards
Entrez_Gene (NCBI)LINC01704  646268  long intergenic non-protein coding RNA 1704
Aliases
GeneCards (Weizmann)LINC01704
Ensembl hg19 (Hinxton)ENSG00000231666 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231666 [Gene_View]  chr1:158132044-158140640 [Contig_View]  LINC01704 [Vega]
ICGC DataPortalENSG00000231666
TCGA cBioPortalLINC01704
AceView (NCBI)LINC01704
Genatlas (Paris)LINC01704
WikiGenes646268
SOURCE (Princeton)LINC01704
Genetics Home Reference (NIH)LINC01704
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01704  -  :&nbóp;"nbsp; chr1:158132044-158140640 -  1q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01704  -     1q23.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01704 - 1q23.1 [CytoView hg19]  LINC01704 - 1q23.1 [CytoView hg38]
Mapping of homologs : NCBILINC01704 [Mapview hg19]  LINC01704 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC029599 DB032996
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01704
Cluster EST : UnigeneHs.506902 [ NCBI ]
CGAP (NCI)Hs.506902
Alternative Splicing GalleryENSG00000231666
Gene ExpressionLINC01704 [ NCBI-GEO ]   LINC01704 [ EBI - ARRAY_EXPRESS ]   LINC01704 [ SEEK ]   LINC01704 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01704 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)646268
GTEX Portal (Tissue expression)LINC01704
Human Protein AtlasENSG00000231666-LINC01704 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01704
DMDM Disease mutations646268
Blocks (Seattle)LINC01704
Human Protein Atlas [tissue]ENSG00000231666-LINC01704 [tissue]
Protein Interaction databases
FunCoupENSG00000231666
BioGRIDLINC01704
STRING (EMBL)LINC01704
ZODIACLINC01704
Ontologies - Pathways
Huge Navigator LINC01704 [HugePedia]
snp3D : Map Gene to Disease646268
BioCentury BCIQLINC01704
ClinGenLINC01704
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD646268
Clinical trialLINC01704
Miscellaneous
canSAR (ICR)LINC01704 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01704
EVEXLINC01704
GoPubMedLINC01704
iHOPLINC01704
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:06 CET 2017

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