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LINC01707 (long intergenic non-protein coding RNA 1707)

Identity

Other alias-
HGNC (Hugo) LINC01707
LocusID (NCBI) 105378785
Atlas_Id 79994
Location 1p31.2  [Link to chromosome band 1p31]
Location_base_pair Starts at 69055898 and ends at 69185002 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

ClinGen
Nomenclature
HGNC (Hugo)LINC01707   52495
Cards
Entrez_Gene (NCBI)LINC01707  105378785  long intergenic non-protein coding RNA 1707
Aliases
GeneCards (Weizmann)LINC01707
Ensembl hg19 (Hinxton)ENSG00000223883 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223883 [Gene_View]  chr1:69055898-69185002 [Contig_View]  LINC01707 [Vega]
ICGC DataPortalENSG00000223883
TCGA cBioPortalLINC01707
AceView (NCBI)LINC01707
Genatlas (Paris)LINC01707
WikiGenes105378785
SOURCE (Princeton)LINC01707
Genetics Home Reference (NIH)LINC01707
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01707  -     chr1:69055898-69185002 +  1p31.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01707  -     1p31.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01707 - 1p31.2 [CytoView hg19]  LINC01707 - 1p31.2 [CytoView hg38]
Mapping of homologs : NCBILINC01707 [Mapview hg19]  LINC01707 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX117229
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01707
Cluster EST : UnigeneHs.127911 [ NCBI ]
CGAP (NCI)Hs.127911
Alternative Splicing GalleryENSG00000223883
Gene ExpressionLINC01707 [ NCBI-GEO ]   LINC01707 [ EBI - ARRAY_EXPRESS ]   LINC01707 [ SEEK ]   LINC01707 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01707 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105378785
GTEX Portal (Tissue expression)LINC01707
Human Protein AtlasENSG00000223883-LINC01707 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01707
DMDM Disease mutations105378785
Blocks (Seattle)LINC01707
Human Protein Atlas [tissue]ENSG00000223883-LINC01707 [tissue]
Protein Interaction databases
FunCoupENSG00000223883
BioGRIDLINC01707
STRING (EMBL)LINC01707
ZODIACLINC01707
Ontologies - Pathways
Huge Navigator LINC01707 [HugePedia]
snp3D : Map Gene to Disease105378785
BioCentury BCIQLINC01707
LINC01707
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105378785
Clinical trialLINC01707
Miscellaneous
canSAR (ICR)LINC01707 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01707
EVEXLINC01707
GoPubMedLINC01707
iHOPLINC01707
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 19:39:56 CET 2017

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