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LINC01710 (long intergenic non-protein coding RNA 1710)

Identity

Other alias-
HGNC (Hugo) LINC01710
LocusID (NCBI) 105372925
Atlas_Id 79375
Location 1q41  [Link to chromosome band 1q41]
Location_base_pair Starts at 218912757 and ends at 218918511 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01710   52498
Cards
Entrez_Gene (NCBI)LINC01710  105372925  long intergenic non-protein coding RNA 1710
Aliases
GeneCards (Weizmann)LINC01710
Ensembl hg19 (Hinxton)ENSG00000225561 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225561 [Gene_View]  chr1:218912757-218918511 [Contig_View]  LINC01710 [Vega]
ICGC DataPortalENSG00000225561
TCGA cBioPortalLINC01710
AceView (NCBI)LINC01710
Genatlas (Paris)LINC01710
WikiGenes105372925
SOURCE (Princeton)LINC01710
Genetics Home Reference (NIH)LINC01710
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01710  -     chr1:218912757-218918511 -  1q41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01710  -     1q41   [Description]    (hg19-Feb_2009)
EnsemblLINC01710 - 1q41 [CytoView hg19]  LINC01710 - 1q41 [CytoView hg38]
Mapping of homologs : NCBILINC01710 [Mapview hg19]  LINC01710 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA936356
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01710
Cluster EST : UnigeneHs.666318 [ NCBI ]
CGAP (NCI)Hs.666318
Alternative Splicing GalleryENSG00000225561
Gene ExpressionLINC01710 [ NCBI-GEO ]   LINC01710 [ EBI - ARRAY_EXPRESS ]   LINC01710 [ SEEK ]   LINC01710 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01710 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105372925
GTEX Portal (Tissue expression)LINC01710
Human Protein AtlasENSG00000225561-LINC01710 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01710
DMDM Disease mutations105372925
Blocks (Seattle)LINC01710
Human Protein Atlas [tissue]ENSG00000225561-LINC01710 [tissue]
Protein Interaction databases
FunCoupENSG00000225561
BioGRIDLINC01710
STRING (EMBL)LINC01710
ZODIACLINC01710
Ontologies - Pathways
Huge Navigator LINC01710 [HugePedia]
snp3D : Map Gene to Disease105372925
BioCentury BCIQLINC01710
ClinGenLINC01710
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105372925
Clinical trialLINC01710
Miscellaneous
canSAR (ICR)LINC01710 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01710
EVEXLINC01710
GoPubMedLINC01710
iHOPLINC01710
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:07 CET 2017

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