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LINC01714 (long intergenic non-protein coding RNA 1714)

Identity

Other alias-
HGNC (Hugo) LINC01714
LocusID (NCBI) 102724539
Atlas_Id 79690
Location 1p36.23  [Link to chromosome band 1p36]
Location_base_pair Starts at 8208672 and ends at 8215208 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01714   52501
Cards
Entrez_Gene (NCBI)LINC01714  102724539  long intergenic non-protein coding RNA 1714
Aliases
GeneCards (Weizmann)LINC01714
Ensembl hg19 (Hinxton)ENSG00000227634 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227634 [Gene_View]  chr1:8208672-8215208 [Contig_View]  LINC01714 [Vega]
ICGC DataPortalENSG00000227634
TCGA cBioPortalLINC01714
AceView (NCBI)LINC01714
Genatlas (Paris)LINC01714
WikiGenes102724539
SOURCE (Princeton)LINC01714
Genetics Home Reference (NIH)LINC01714
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01714  -     chr1:8208672-8215208 +  1p36.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01714  -     1p36.23   [Description]    (hg19-Feb_2009)
EnsemblLINC01714 - 1p36.23 [CytoView hg19]  LINC01714 - 1p36.23 [CytoView hg38]
Mapping of homologs : NCBILINC01714 [Mapview hg19]  LINC01714 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BQ011841
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01714
Cluster EST : UnigeneHs.516816 [ NCBI ]
CGAP (NCI)Hs.516816
Alternative Splicing GalleryENSG00000227634
Gene ExpressionLINC01714 [ NCBI-GEO ]   LINC01714 [ EBI - ARRAY_EXPRESS ]   LINC01714 [ SEEK ]   LINC01714 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01714 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102724539
GTEX Portal (Tissue expression)LINC01714
Human Protein AtlasENSG00000227634-LINC01714 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01714
DMDM Disease mutations102724539
Blocks (Seattle)LINC01714
Human Protein Atlas [tissue]ENSG00000227634-LINC01714 [tissue]
Protein Interaction databases
FunCoupENSG00000227634
BioGRIDLINC01714
STRING (EMBL)LINC01714
ZODIACLINC01714
Ontologies - Pathways
Huge Navigator LINC01714 [HugePedia]
snp3D : Map Gene to Disease102724539
BioCentury BCIQLINC01714
ClinGenLINC01714
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102724539
Clinical trialLINC01714
Miscellaneous
canSAR (ICR)LINC01714 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01714
EVEXLINC01714
GoPubMedLINC01714
iHOPLINC01714
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:07 CET 2017

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