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LINC01718 (long intergenic non-protein coding RNA 1718)

Identity

Other alias-
HGNC (Hugo) LINC01718
LocusID (NCBI) 100506470
Atlas_Id 79886
Location 20q13.33  [Link to chromosome band 20q13]
Location_base_pair Starts at 61079064 and ends at 61080179 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01718   52505
Cards
Entrez_Gene (NCBI)LINC01718  100506470  long intergenic non-protein coding RNA 1718
Aliases
GeneCards (Weizmann)LINC01718
Ensembl hg19 (Hinxton)ENSG00000229606 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229606 [Gene_View]  chr20:61079064-61080179 [Contig_View]  LINC01718 [Vega]
ICGC DataPortalENSG00000229606
TCGA cBioPortalLINC01718
AceView (NCBI)LINC01718
Genatlas (Paris)LINC01718
WikiGenes100506470
SOURCE (Princeton)LINC01718
Genetics Home Reference (NIH)LINC01718
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01718  -     chr20:61079064-61080179 +  20q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01718  -     20q13.33   [Description]    (hg19-Feb_2009)
EnsemblLINC01718 - 20q13.33 [CytoView hg19]  LINC01718 - 20q13.33 [CytoView hg38]
Mapping of homologs : NCBILINC01718 [Mapview hg19]  LINC01718 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX106486 HY047124
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01718
Cluster EST : UnigeneHs.125674 [ NCBI ]
CGAP (NCI)Hs.125674
Alternative Splicing GalleryENSG00000229606
Gene ExpressionLINC01718 [ NCBI-GEO ]   LINC01718 [ EBI - ARRAY_EXPRESS ]   LINC01718 [ SEEK ]   LINC01718 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01718 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506470
GTEX Portal (Tissue expression)LINC01718
Human Protein AtlasENSG00000229606-LINC01718 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01718
DMDM Disease mutations100506470
Blocks (Seattle)LINC01718
Human Protein Atlas [tissue]ENSG00000229606-LINC01718 [tissue]
Protein Interaction databases
FunCoupENSG00000229606
BioGRIDLINC01718
STRING (EMBL)LINC01718
ZODIACLINC01718
Ontologies - Pathways
Huge Navigator LINC01718 [HugePedia]
snp3D : Map Gene to Disease100506470
BioCentury BCIQLINC01718
ClinGenLINC01718
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506470
Clinical trialLINC01718
Miscellaneous
canSAR (ICR)LINC01718 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01718
EVEXLINC01718
GoPubMedLINC01718
iHOPLINC01718
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PqbMed>/DD>
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:41:46 CET 2017

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