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LINC01724 (long intergenic non-protein coding RNA 1724)

Identity

Other alias-
HGNC (Hugo) LINC01724
LocusID (NCBI) 105371673
Atlas_Id 79774
Location 1q31.3  [Link to chromosome band 1q31]
Location_base_pair Starts at 196044880 and ends at 196088715 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01724   52512
Cards
Entrez_Gene (NCBI)LINC01724  105371673  long intergenic non-protein coding RNA 1724
Aliases
GeneCards (Weizmann)LINC01724
Ensembl hg19 (Hinxton)ENSG00000227421 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227421 [Gene_View]  chr1:196044880-196088715 [Contig_View]  LINC01724 [Vega]
ICGC DataPortalENSG00000227421
TCGA cBioPortalLINC01724
AceView (NCBI)LINC01724
Genatlas (Paris)LINC01724
WikiGenes105371673
SOURCE (Princeton)LINC01724
Genetics Home Reference (NIH)LINC01724
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01724  -     chr1:196044880-196088715 -  1q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01724  -     1q31.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01724 - 1q31.3 [CytoView hg19]  LINC01724 - 1q31.3 [CytoView hg38]
Mapping of homologs : NCBILINC01724 [Mapview hg19]  LINC01724 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01724
Alternative Splicing GalleryENSG00000227421
Gene ExpressionLINC01724 [ NCBI-GEO ]   LINC01724 [ EBI - ARRAY_EXPRESS ]   LINC01724 [ SEEK ]   LINC01724 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01724 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105371673
GTEX Portal (Tissue expression)LINC01724
Human Protein AtlasENSG00000227421-LINC01724 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01724
DMDM Disease mutations105371673
Blocks (Seattle)LINC01724
Human Protein Atlas [tissue]ENSG00000227421-LINC01724 [tissue]
Protein Interaction databases
FunCoupENSG00000227421
BioGRIDLINC01724
STRING (EMBL)LINC01724
ZODIACLINC01724
Ontologies - Pathways
Huge Navigator LINC01724 [HugePedia]
snp3D : Map Gene to Disease105371673
BioCentury BCIQLINC01724
ClinGenLINC01724
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105371673
Clinical trialLINC01724
Miscellaneous
canSAR (ICR)LINC01724 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01724
EVEXLINC01724
GoPubMedLINC01724
iHOPLINC01724
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:08 CET 2017

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