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LINC01728 (long intergenic non-protein coding RNA 1728)

Identity

Other alias-
HGNC (Hugo) LINC01728
LocusID (NCBI) 105372626
Atlas_Id 80001
Location 20q13.12  [Link to chromosome band 20q13]
Location_base_pair Starts at 43894718 and ends at 43895471 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01728   52516
Cards
Entrez_Gene (NCBI)LINC01728  105372626  long intergenic non-protein coding RNA 1728
Aliases
GeneCards (Weizmann)LINC01728
Ensembl hg19 (Hinxton)ENSG00000233277 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233277 [Gene_View]  chr20:43894718-43895471 [Contig_View]  LINC01728 [Vega]
ICGC DataPortalENSG00000233277
TCGA cBioPortalLINC01728
AceView (NCBI)LINC01728
Genatlas (Paris)LINC01728
WikiGenes105372626
SOURCE (Princeton)LINC01728
Genetics Home Reference (NIH)LINC01728
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01728  -     chr20:43894718-43895471 +  20q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01728  -     20q13.12   [Description]    (hg19-Feb_2009)
EnsemblLINC01728 - 20q13.12 [CytoView hg19]  LINC01728 - 20q13.12 [CytoView hg38]
Mapping of homologs : NCBILINC01728 [Mapview hg19]  LINC01728 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA910031 BG185028 BX089899
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01728
Cluster EST : UnigeneHs.130555 [ NCBI ]
CGAP (NCI)Hs.130555
Alternative Splicing GalleryENSG00000233277
Gene ExpressionLINC01728 [ NCBI-GEO ]   LINC01728 [ EBI - ARRAY_EXPRESS ]   LINC01728 [ SEEK ]   LINC01728 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01728 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105372626
GTEX Portal (Tissue expression)LINC01728
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01728
DMDM Disease mutations105372626
Blocks (Seattle)LINC01728
Human Protein AtlasENSG00000233277
Protein Interaction databases
FunCoupENSG00000233277
BioGRIDLINC01728
STRING (EMBL)LINC01728
ZODIACLINC01728
Ontologies - Pathways
Huge Navigator LINC01728 [HugePedia]
snp3D : Map Gene to Disease105372626
BioCentury BCIQLINC01728
ClinGenLINC01728
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105372626
Clinical trialLINC01728
Miscellaneous
canSAR (ICR)LINC01728 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01728
EVEXLINC01728
GoPubMedLINC01728
iHOPLINC01728
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:15:11 CEST 2017

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