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LINC01729 (long intergenic non-protein coding RNA 1729)

Identity

Other alias-
HGNC (Hugo) LINC01729
LocusID (NCBI) 101929207
Atlas_Id 79442
Location 20p12.3  [Link to chromosome band 20p12]
Location_base_pair Starts at 5507875 and ends at 5510002 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01729   52517
Cards
Entrez_Gene (NCBI)LINC01729  101929207  long intergenic non-protein coding RNA 1729
Aliases
GeneCards (Weizmann)LINC01729
Ensembl hg19 (Hinxton)ENSG00000225640 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225640 [Gene_View]  chr20:5507875-5510002 [Contig_View]  LINC01729 [Vega]
ICGC DataPortalENSG00000225640
TCGA cBioPortalLINC01729
AceView (NCBI)LINC01729
Genatlas (Paris)LINC01729
WikiGenes101929207
SOURCE (Princeton)LINC01729
Genetics Home Reference (NIH)LINC01729
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01729  -     chr20:5507875-5510002 -  20p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01729  -     20p12.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01729 - 20p12.3 [CytoView hg19]  LINC01729 - 20p12.3 [CytoView hg38]
Mapping of homologs : NCBILINC01729 [Mapview hg19]  LINC01729 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI218423
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01729
Cluster EST : UnigeneHs.516871 [ NCBI ]
CGAP (NCI)Hs.516871
Alternative Splicing GalleryENSG00000225640
Gene ExpressionLINC01729 [ NCBI-GEO ]   LINC01729 [ EBI - ARRAY_EXPRESS ]   LINC01729 [ SEEK ]   LINC01729 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01729 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929207
GTEX Portal (Tissue expression)LINC01729
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01729
DMDM Disease mutations101929207
Blocks (Seattle)LINC01729
Human Protein AtlasENSG00000225640
Protein Interaction databases
FunCoupENSG00000225640
BioGRIDLINC01729
STRING (EMBL)LINC01729
ZODIACLINC01729
Ontologies - Pathways
Huge Navigator LINC01729 [HugePedia]
snp3D : Map Gene to Disease101929207
BioCentury BCIQLINC01729
ClinGenLINC01729
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929207
Clinical trialLINC01729
Miscellaneous
canSAR (ICR)LINC01729 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01729
EVEXLINC01729
GoPubMedLINC01729
iHOPLINC01729
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:15:11 CEST 2017

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