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LINC01731 (long intergenic non-protein coding RNA 1731)

Identity

Other alias-
HGNC (Hugo) LINC01731
LocusID (NCBI) 105371226
Atlas_Id 79517
Location 1q21.2  [Link to chromosome band 1q21]
Location_base_pair Starts at 148269417 and ends at 148280967 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01731   52519
Cards
Entrez_Gene (NCBI)LINC01731  105371226  long intergenic non-protein coding RNA 1731
Aliases
GeneCards (Weizmann)LINC01731
Ensembl hg19 (Hinxton)ENSG00000234283 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234283 [Gene_View]  chr1:148269417-148280967 [Contig_View]  LINC01731 [Vega]
ICGC DataPortalENSG00000234283
TCGA cBioPortalLINC01731
AceView (NCBI)LINC01731
Genatlas (Paris)LINC01731
WikiGenes105371226
SOURCE (Princeton)LINC01731
Genetics Home Reference (NIH)LINC01731
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01731  -     chr1:148269417-148280967 -  1q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01731  -     1q21.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01731 - 1q21.2 [CytoView hg19]  LINC01731 - 1q21.2 [CytoView hg38]
Mapping of homologs : NCBILINC01731 [Mapview hg19]  LINC01731 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096567
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01731
Cluster EST : UnigeneHs.263424 [ NCBI ]
CGAP (NCI)Hs.263424
Alternative Splicing GalleryENSG00000234283
Gene ExpressionLINC01731 [ NCBI-GEO ]   LINC01731 [ EBI - ARRAY_EXPRESS ]   LINC01731 [ SEEK ]   LINC01731 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01731 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105371226
GTEX Portal (Tissue expression)LINC01731
Human Protein AtlasENSG00000234283-LINC01731 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01731
DMDM Disease mutations105371226
Blocks (Seattle)LINC01731
Human Protein Atlas [tissue]ENSG00000234283-LINC01731 [tissue]
Protein Interaction databases
FunCoupENSG00000234283
BioGRIDLINC01731
STRING (EMBL)LINC01731
ZODIACLINC01731
Ontologies - Pathways
Huge Navigator LINC01731 [HugePedia]
snp3D : Map Gene to Disease105371226
BioCentury BCIQLINC01731
ClinGenLINC01731
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105371226
Clinical trialLINC01731
Miscellaneous
canSAR (ICR)LINC01731 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01731
EVEXLINC01731
GoPubMedLINC01731
iHOPLINC01731
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:09 CET 2017

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