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LINC01733 (long intergenic non-protein coding RNA 1733)

Identity

Other alias-
HGNC (Hugo) LINC01733
LocusID (NCBI) 101926955
Atlas_Id 79155
Location 20p11.1  [Link to chromosome band 20p11]
Location_base_pair Starts at 25955812 and ends at 25969288 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01733   52521
Cards
Entrez_Gene (NCBI)LINC01733  101926955  long intergenic non-protein coding RNA 1733
Aliases
GeneCards (Weizmann)LINC01733
Ensembl hg19 (Hinxton)ENSG00000226203 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226203 [Gene_View]  chr20:25955812-25969288 [Contig_View]  LINC01733 [Vega]
ICGC DataPortalENSG00000226203
TCGA cBioPortalLINC01733
AceView (NCBI)LINC01733
Genatlas (Paris)LINC01733
WikiGenes101926955
SOURCE (Princeton)LINC01733
Genetics Home Reference (NIH)LINC01733
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01733  -     chr20:25955812-25969288 +  20p11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01733  -     20p11.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01733 - 20p11.1 [CytoView hg19]  LINC01733 - 20p11.1 [CytoView hg38]
Mapping of homologs : NCBILINC01733 [Mapview hg19]  LINC01733 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC052952
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01733
Cluster EST : UnigeneHs.625431 [ NCBI ]
CGAP (NCI)Hs.625431
Alternative Splicing GalleryENSG00000226203
Gene ExpressionLINC01733 [ NCBI-GEO ]   LINC01733 [ EBI - ARRAY_EXPRESS ]   LINC01733 [ SEEK ]   LINC01733 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01733 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101926955
GTEX Portal (Tissue expression)LINC01733
Human Protein AtlasENSG00000226203-LINC01733 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01733
DMDM Disease mutations101926955
Blocks (Seattle)LINC01733
Human Protein Atlas [tissue]ENSG00000226203-LINC01733 [tissue]
Protein Interaction databases
FunCoupENSG00000226203
BioGRIDLINC01733
STRING (EMBL)LINC01733
ZODIACLINC01733
Ontologies - Pathways
Huge Navigator LINC01733 [HugePedia]
snp3D : Map Gene to Disease101926955
BioCentury BCIQLINC01733
ClinGenLINC01733
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101926955
Clinical trialLINC01733
Miscellaneous
canSAR (ICR)LINC01733 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01733
EVEXLINC01733
GoPubMedLINC01733
iHOPLINC01733
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:41:48 CET 2017

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