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LINC01734 (long intergenic non-protein coding RNA 1734)

Identity

Other alias-
HGNC (Hugo) LINC01734
LocusID (NCBI) 339568
Atlas_Id 80201
Location 20q12  [Link to chromosome band 20q12]
Location_base_pair Starts at 39213781 and ends at 39224748 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01734   52522
Cards
Entrez_Gene (NCBI)LINC01734  339568  long intergenic non-protein coding RNA 1734
Aliases
GeneCards (Weizmann)LINC01734
Ensembl hg19 (Hinxton)ENSG00000230324 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230324 [Gene_View]  chr20:39213781-39224748 [Contig_View]  LINC01734 [Vega]
ICGC DataPortalENSG00000230324
TCGA cBioPortalLINC01734
AceView (NCBI)LINC01734
Genatlas (Paris)LINC01734
WikiGenes339568
SOURCE (Princeton)LINC01734
Genetics Home Reference (NIH)LINC01734
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01734  -     chr20:39213781-39224748 -  20q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01734  -     20q12   [Description]    (hg19-Feb_2009)
EnsemblLINC01734 - 20q12 [CytoView hg19]  LINC01734 - 20q12 [CytoView hg38]
Mapping of homologs : NCBILINC01734 [Mapview hg19]  LINC01734 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043524
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01734
Cluster EST : UnigeneHs.434319 [ NCBI ]
CGAP (NCI)Hs.434319
Alternative Splicing GalleryENSG00000230324
Gene ExpressionLINC01734 [ NCBI-GEO ]   LINC01734 [ EBI - ARRAY_EXPRESS ]   LINC01734 [ SEEK ]   LINC01734 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01734 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)339568
GTEX Portal (Tissue expression)LINC01734
Human Protein AtlasENSG00000230324-LINC01734 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01734
DMDM Disease mutations339568
Blocks (Seattle)LINC01734
Human Protein Atlas [tissue]ENSG00000230324-LINC01734 [tissue]
IPIIPI00984450   
Protein Interaction databases
FunCoupENSG00000230324
BioGRIDLINC01734
STRING (EMBL)LINC01734
ZODIACLINC01734
Ontologies - Pathways
Huge Navigator LINC01734 [HugePedia]
snp3D : Map Gene to Disease339568
BioCentury BCIQLINC01734
ClinGenLINC01734
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD339568
Clinical trialLINC01734
Miscellaneous
canSAR (ICR)LINC01734 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01734
EVEXLINC01734
GoPubMedLINC01734
iHOPLINC01734
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:41:48 CET 2017

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