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LINC01740 (long intergenic non-protein coding RNA 1740)

Identity

Other alias-
HGNC (Hugo) LINC01740
LocusID (NCBI) 101929565
Atlas_Id 80122
Location 1q32.3  [Link to chromosome band 1q32]
Location_base_pair Starts at 212545694 and ends at 212556066 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01740   52528
Cards
Entrez_Gene (NCBI)LINC01740  101929565  long intergenic non-protein coding RNA 1740
Aliases
GeneCards (Weizmann)LINC01740
Ensembl hg19 (Hinxton)ENSG00000228067 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228067 [Gene_View]  chr1:212545694-212556066 [Contig_View]  LINC01740 [Vega]
ICGC DataPortalENSG00000228067
TCGA cBioPortalLINC01740
AceView (NCBI)LINC01740
Genatlas (Paris)LINC01740
WikiGenes101929565
SOURCE (Princeton)LINC01740
Genetics Home Reference (NIH)LINC01740
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01740  -     chr1:212545694-212556066 +  1q32.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01740  -     1q32.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01740 - 1q32.3 [CytoView hg19]  LINC01740 - 1q32.3 [CytoView hg38]
Mapping of homologs : NCBILINC01740 [Mapview hg19]  LINC01740 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG193173 BG196701
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01740
Alternative Splicing GalleryENSG00000228067
Gene ExpressionLINC01740 [ NCBI-GEO ]   LINC01740 [ EBI - ARRAY_EXPRESS ]   LINC01740 [ SEEK ]   LINC01740 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01740 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929565
GTEX Portal (Tissue expression)LINC01740
Human Protein AtlasENSG00000228067-LINC01740 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01740
DMDM Disease mutations101929565
Blocks (Seattle)LINC01740
Human Protein Atlas [tissue]ENSG00000228067-LINC01740 [tissue]
Protein Interaction databases
FunCoupENSG00000228067
BioGRIDLINC01740
STRING (EMBL)LINC01740
ZODIACLINC01740
Ontologies - Pathways
Huge Navigator LINC01740 [HugePedia]
snp3D : Map Gene to Disease101929565
BioCentury BCIQLINC01740
ClinGenLINC01740
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929565
Clinical trialLINC01740
Miscellaneous
canSAR (ICR)LINC01740 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01740
EVEXLINC01740
GoPubMedLINC01740
iHOPLINC01740
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:40:02 CET 2017

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