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LINC01741 (long intergenic non-protein coding RNA 1741)

Identity

Other alias-
HGNC (Hugo) LINC01741
LocusID (NCBI) 101928778
Atlas_Id 79655
Location 1q25.2  [Link to chromosome band 1q25]
Location_base_pair Starts at 177700524 and ends at 177710330 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01741   52529
Cards
Entrez_Gene (NCBI)LINC01741  101928778  long intergenic non-protein coding RNA 1741
Aliases
GeneCards (Weizmann)LINC01741
Ensembl hg19 (Hinxton)ENSG00000236720 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236720 [Gene_View]  chr1:177700524-177710330 [Contig_View]  LINC01741 [Vega]
ICGC DataPortalENSG00000236720
TCGA cBioPortalLINC01741
AceView (NCBI)LINC01741
Genatlas (Paris)LINC01741
WikiGenes101928778
SOURCE (Princeton)LINC01741
Genetics Home Reference (NIH)LINC01741
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01741  -     chr1:177700524-177710330 +  1q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01741  -     1q25.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01741 - 1q25.2 [CytoView hg19]  LINC01741 - 1q25.2 [CytoView hg38]
Mapping of homologs : NCBILINC01741 [Mapview hg19]  LINC01741 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC031234
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01741
Cluster EST : UnigeneHs.573792 [ NCBI ]
CGAP (NCI)Hs.573792
Alternative Splicing GalleryENSG00000236720
Gene ExpressionLINC01741 [ NCBI-GEO ]   LINC01741 [ EBI - ARRAY_EXPRESS ]   LINC01741 [ SEEK ]   LINC01741 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01741 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928778
GTEX Portal (Tissue expression)LINC01741
Human Protein AtlasENSG00000236720-LINC01741 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01741
DMDM Disease mutations101928778
Blocks (Seattle)LINC01741
Human Protein Atlas [tissue]ENSG00000236720-LINC01741 [tissue]
Protein Interaction databases
FunCoupENSG00000236720
BioGRIDLINC01741
STRING (EMBL)LINC01741
ZODIACLINC01741
Ontologies - Pathways
Huge Navigator LINC01741 [HugePedia]
snp3D : Map Gene to Disease101928778
BioCentury BCIQLINC01741
ClinGenLINC01741
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928778
Clinical trialLINC01741
Miscellaneous
canSAR (ICR)LINC01741 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01741
EVEXLINC01741
GoPubMedLINC01741
iHOPLINC01741
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:10 CET 2017

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