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LINC01742 (long intergenic non-protein coding RNA 1742)

Identity

Other alias-
HGNC (Hugo) LINC01742
LocusID (NCBI) 105376992
Atlas_Id 79273
Location 20q13.32  [Link to chromosome band 20q13]
Location_base_pair Starts at 58003904 and ends at 58004648 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01742   52530
Cards
Entrez_Gene (NCBI)LINC01742  105376992  long intergenic non-protein coding RNA 1742
Aliases
GeneCards (Weizmann)LINC01742
Ensembl hg19 (Hinxton)ENSG00000275852 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000275852 [Gene_View]  chr20:58003904-58004648 [Contig_View]  LINC01742 [Vega]
ICGC DataPortalENSG00000275852
TCGA cBioPortalLINC01742
AceView (NCBI)LINC01742
Genatlas (Paris)LINC01742
WikiGenes105376992
SOURCE (Princeton)LINC01742
Genetics Home Reference (NIH)LINC01742
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01742  -     chr20:58003904-58004648 +  20q13.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01742  -     20q13.32   [Description]    (hg19-Feb_2009)
EnsemblLINC01742 - 20q13.32 [CytoView hg19]  LINC01742 - 20q13.32 [CytoView hg38]
Mapping of homologs : NCBILINC01742 [Mapview hg19]  LINC01742 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG194291
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01742
Cluster EST : UnigeneHs.736662 [ NCBI ]
CGAP (NCI)Hs.736662
Alternative Splicing GalleryENSG00000275852
Gene ExpressionLINC01742 [ NCBI-GEO ]   LINC01742 [ EBI - ARRAY_EXPRESS ]   LINC01742 [ SEEK ]   LINC01742 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01742 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105376992
GTEX Portal (Tissue expression)LINC01742
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01742
DMDM Disease mutations105376992
Blocks (Seattle)LINC01742
Human Protein AtlasENSG00000275852
Protein Interaction databases
FunCoupENSG00000275852
BioGRIDLINC01742
STRING (EMBL)LINC01742
ZODIACLINC01742
Ontologies - Pathways
Huge Navigator LINC01742 [HugePedia]
snp3D : Map Gene to Disease105376992
BioCentury BCIQLINC01742
ClinGenLINC01742
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105376992
Clinical trialLINC01742
Miscellaneous
canSAR (ICR)LINC01742 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01742
EVEXLINC01742
GoPubMedLINC01742
iHOPLINC01742
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:15:13 CEST 2017

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