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LINC01743 (long intergenic non-protein coding RNA 1743)

Identity

Other alias-
HGNC (Hugo) LINC01743
LocusID (NCBI) 255654
Atlas_Id 78884
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 246516039 and ends at 246524287 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01743   52531
Cards
Entrez_Gene (NCBI)LINC01743  255654  long intergenic non-protein coding RNA 1743
Aliases
GeneCards (Weizmann)LINC01743
Ensembl hg19 (Hinxton)ENSG00000242042 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000242042 [Gene_View]  chr1:246516039-246524287 [Contig_View]  LINC01743 [Vega]
ICGC DataPortalENSG00000242042
TCGA cBioPortalLINC01743
AceView (NCBI)LINC01743
Genatlas (Paris)LINC01743
WikiGenes255654
SOURCE (Princeton)LINC01743
Genetics Home Reference (NIH)LINC01743
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01743  -     chr1:246516039-246524287 -  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01743  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblLINC01743 - 1q44 [CytoView hg19]  LINC01743 - 1q44 [CytoView hg38]
Mapping of homologs : NCBILINC01743 [Mapview hg19]  LINC01743 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC039539
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01743
Cluster EST : UnigeneHs.407570 [ NCBI ]
CGAP (NCI)Hs.407570
Alternative Splicing GalleryENSG00000242042
Gene ExpressionLINC01743 [ NCBI-GEO ]   LINC01743 [ EBI - ARRAY_EXPRESS ]   LINC01743 [ SEEK ]   LINC01743 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01743 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)255654
GTEX Portal (Tissue expression)LINC01743
Human Protein AtlasENSG00000242042-LINC01743 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01743
DMDM Disease mutations255654
Blocks (Seattle)LINC01743
Human Protein Atlas [tissue]ENSG00000242042-LINC01743 [tissue]
IPIIPI00745949   
Protein Interaction databases
FunCoupENSG00000242042
BioGRIDLINC01743
STRING (EMBL)LINC01743
ZODIACLINC01743
Ontologies - Pathways
Huge Navigator LINC01743 [HugePedia]
snp3D : Map Gene to Disease255654
BioCentury BCIQLINC01743
ClinGenLINC01743
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD255654
Clinical trialLINC01743
Miscellaneous
canSAR (ICR)LINC01743 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01743
EVEXLINC01743
GoPubMedLINC01743
iHOPLINC01743
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:10 CET 2017

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