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LINC01744 (long intergenic non-protein coding RNA 1744)

Identity

Other alias-
HGNC (Hugo) LINC01744
LocusID (NCBI) 101927683
Atlas_Id 79908
Location 1q42.2  [Link to chromosome band 1q42]
Location_base_pair Starts at 232727254 and ends at 232742715 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01744   52532
Cards
Entrez_Gene (NCBI)LINC01744  101927683  long intergenic non-protein coding RNA 1744
Aliases
GeneCards (Weizmann)LINC01744
Ensembl hg19 (Hinxton)ENSG00000236497 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236497 [Gene_View]  chr1:232727254-232742715 [Contig_View]  LINC01744 [Vega]
ICGC DataPortalENSG00000236497
TCGA cBioPortalLINC01744
AceView (NCBI)LINC01744
Genatlas (Paris)LINC01744
WikiGenes101927683
SOURCE (Princeton)LINC01744
Genetics Home Reference (NIH)LINC01744
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01744  -     chr1:232727254-232742715 -  1q42.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01744  -     1q42.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01744 - 1q42.2 [CytoView hg19]  LINC01744 - 1q42.2 [CytoView hg38]
Mapping of homologs : NCBILINC01744 [Mapview hg19]  LINC01744 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093200
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01744
Cluster EST : UnigeneHs.520568 [ NCBI ]
CGAP (NCI)Hs.520568
Alternative Splicing GalleryENSG00000236497
Gene ExpressionLINC01744 [ NCBI-GEO ]   LINC01744 [ EBI - ARRAY_EXPRESS ]   LINC01744 [ SEEK ]   LINC01744 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01744 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927683
GTEX Portal (Tissue expression)LINC01744
Human Protein AtlasENSG00000236497-LINC01744 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01744
DMDM Disease mutations101927683
Blocks (Seattle)LINC01744
Human Protein Atlas [tissue]ENSG00000236497-LINC01744 [tissue]
Protein Interaction databases
FunCoupENSG00000236497
BioGRIDLINC01744
STRING (EMBL)LINC01744
ZODIACLINC01744
Ontologies - Pathways
Huge Navigator LINC01744 [HugePedia]
snp3D : Map Gene to Disease101927683
BioCentury BCIQLINC01744
ClinGenLINC01744
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927683
Clinical trialLINC01744
Miscellaneous
canSAR (ICR)LINC01744 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01744
EVEXLINC01744
GoPubMedLINC01744
iHOPLINC01744
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:10 CET 2017

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