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LINC01745 (long intergenic non-protein coding RNA 1745)

Identity

Other alias-
HGNC (Hugo) LINC01745
LocusID (NCBI) 105373199
Atlas_Id 79572
Location 1q42.2  [Link to chromosome band 1q42]
Location_base_pair Starts at 232718071 and ends at 232722249 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01745   52533
Cards
Entrez_Gene (NCBI)LINC01745  105373199  long intergenic non-protein coding RNA 1745
Aliases
GeneCards (Weizmann)LINC01745
Ensembl hg19 (Hinxton)ENSG00000225919 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225919 [Gene_View]  chr1:232718071-232722249 [Contig_View]  LINC01745 [Vega]
ICGC DataPortalENSG00000225919
TCGA cBioPortalLINC01745
AceView (NCBI)LINC01745
Genatlas (Paris)LINC01745
WikiGenes105373199
SOURCE (Princeton)LINC01745
Genetics Home Reference (NIH)LINC01745
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01745  -     chr1:232718071-232722249 +  1q42.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01745  -     1q42.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01745 - 1q42.2 [CytoView hg19]  LINC01745 - 1q42.2 [CytoView hg38]
Mapping of homologs : NCBILINC01745 [Mapview hg19]  LINC01745 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW269725
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01745
Cluster EST : UnigeneHs.254475 [ NCBI ]
CGAP (NCI)Hs.254475
Alternative Splicing GalleryENSG00000225919
Gene ExpressionLINC01745 [ NCBI-GEO ]   LINC01745 [ EBI - ARRAY_EXPRESS ]   LINC01745 [ SEEK ]   LINC01745 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01745 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105373199
GTEX Portal (Tissue expression)LINC01745
Human Protein AtlasENSG00000225919-LINC01745 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01745
DMDM Disease mutations105373199
Blocks (Seattle)LINC01745
Human Protein Atlas [tissue]ENSG00000225919-LINC01745 [tissue]
Protein Interaction databases
FunCoupENSG00000225919
BioGRIDLINC01745
STRING (EMBL)LINC01745
ZODIACLINC01745
Ontologies - Pathways
Huge Navigator LINC01745 [HugePedia]
snp3D : Map Gene to Disease105373199
BioCentury BCIQLINC01745
ClinGenLINC01745
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105373199
Clinical trialLINC01745
Miscellaneous
canSAR (ICR)LINC01745 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01745
EVEXLINC01745
GoPubMedLINC01745
iHOPLINC01745
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:11 CET 2017

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