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LINC01747 (long intergenic non-protein coding RNA 1747)

Identity

Other alias-
HGNC (Hugo) LINC01747
LocusID (NCBI) 105372566
Atlas_Id 79348
Location 20p11.21  [Link to chromosome band 20p11]
Location_base_pair Starts at 22667293 and ends at 22685344 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01747   52536
Cards
Entrez_Gene (NCBI)LINC01747  105372566  long intergenic non-protein coding RNA 1747
Aliases
GeneCards (Weizmann)LINC01747
Ensembl hg19 (Hinxton)ENSG00000230400 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230400 [Gene_View]  chr20:22667293-22685344 [Contig_View]  LINC01747 [Vega]
ICGC DataPortalENSG00000230400
TCGA cBioPortalLINC01747
AceView (NCBI)LINC01747
Genatlas (Paris)LINC01747
WikiGenes105372566
SOURCE (Princeton)LINC01747
Genetics Home Reference (NIH)LINC01747
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01747  -     chr20:22667293-22685344 -  20p11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01747  -     20p11.21   [Description]    (hg19-Feb_2009)
EnsemblLINC01747 - 20p11.21 [CytoView hg19]  LINC01747 - 20p11.21 [CytoView hg38]
Mapping of homologs : NCBILINC01747 [Mapview hg19]  LINC01747 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA432311 AK055550 DB081848
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01747
Cluster EST : UnigeneHs.555065 [ NCBI ]
CGAP (NCI)Hs.555065
Alternative Splicing GalleryENSG00000230400
Gene ExpressionLINC01747 [ NCBI-GEO ]   LINC01747 [ EBI - ARRAY_EXPRESS ]   LINC01747 [ SEEK ]   LINC01747 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01747 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105372566
GTEX Portal (Tissue expression)LINC01747
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01747
DMDM Disease mutations105372566
Blocks (Seattle)LINC01747
Human Protein AtlasENSG00000230400
Protein Interaction databases
FunCoupENSG00000230400
BioGRIDLINC01747
STRING (EMBL)LINC01747
ZODIACLINC01747
Ontologies - Pathways
Huge Navigator LINC01747 [HugePedia]
snp3D : Map Gene to Disease105372566
BioCentury BCIQLINC01747
ClinGenLINC01747
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105372566
Clinical trialLINC01747
Miscellaneous
canSAR (ICR)LINC01747 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01747
EVEXLINC01747
GoPubMedLINC01747
iHOPLINC01747
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:15:13 CEST 2017

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