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LINC01748 (long intergenic non-protein coding RNA 1748)

Identity

Other alias-
HGNC (Hugo) LINC01748
LocusID (NCBI) 105378763
Atlas_Id 79166
Location 1p32.1  [Link to chromosome band 1p32]
Location_base_pair Starts at 60515716 and ends at 60622685 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01748   52535
Cards
Entrez_Gene (NCBI)LINC01748  105378763  long intergenic non-protein coding RNA 1748
Aliases
GeneCards (Weizmann)LINC01748
Ensembl hg19 (Hinxton)ENSG00000226476 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226476 [Gene_View]  chr1:60515716-60622685 [Contig_View]  LINC01748 [Vega]
ICGC DataPortalENSG00000226476
TCGA cBioPortalLINC01748
AceView (NCBI)LINC01748
Genatlas (Paris)LINC01748
WikiGenes105378763
SOURCE (Princeton)LINC01748
Genetics Home Reference (NIH)LINC01748
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01748  -     chr1:60515716-60622685 -  1p32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01748  -     1p32.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01748 - 1p32.1 [CytoView hg19]  LINC01748 - 1p32.1 [CytoView hg38]
Mapping of homologs : NCBILINC01748 [Mapview hg19]  LINC01748 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF279783
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01748
Cluster EST : UnigeneHs.551175 [ NCBI ]
CGAP (NCI)Hs.551175
Alternative Splicing GalleryENSG00000226476
Gene ExpressionLINC01748 [ NCBI-GEO ]   LINC01748 [ EBI - ARRAY_EXPRESS ]   LINC01748 [ SEEK ]   LINC01748 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01748 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105378763
GTEX Portal (Tissue expression)LINC01748
Human Protein AtlasENSG00000226476-LINC01748 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01748
DMDM Disease mutations105378763
Blocks (Seattle)LINC01748
Human Protein Atlas [tissue]ENSG00000226476-LINC01748 [tissue]
Protein Interaction databases
FunCoupENSG00000226476
BioGRIDLINC01748
STRING (EMBL)LINC01748
ZODIACLINC01748
Ontologies - Pathways
Huge Navigator LINC01748 [HugePedia]
snp3D : Map Gene to Disease105378763
BioCentury BCIQLINC01748
ClinGenLINC01748
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105378763
Clinical trialLINC01748
Miscellaneous
canSAR (ICR)LINC01748 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01748
EVEXLINC01748
GoPubMedLINC01748
iHOPLINC01748
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:11 CET 2017

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