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LINC01753 (long intergenic non-protein coding RNA 1753)

Identity

Other alias-
HGNC (Hugo) LINC01753
LocusID (NCBI) 105378739
Atlas_Id 80163
Location 1p32.2  [Link to chromosome band 1p32]
Location_base_pair Starts at 55915609 and ends at 55944963 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01753   52541
Cards
Entrez_Gene (NCBI)LINC01753  105378739  long intergenic non-protein coding RNA 1753
Aliases
GeneCards (Weizmann)LINC01753
Ensembl hg19 (Hinxton)ENSG00000230250 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230250 [Gene_View]  chr1:55915609-55944963 [Contig_View]  LINC01753 [Vega]
ICGC DataPortalENSG00000230250
TCGA cBioPortalLINC01753
AceView (NCBI)LINC01753
Genatlas (Paris)LINC01753
WikiGenes105378739
SOURCE (Princeton)LINC01753
Genetics Home Reference (NIH)LINC01753
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01753  -     chr1:55915609-55944963 -  1p32.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01753  -     1p32.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01753 - 1p32.2 [CytoView hg19]  LINC01753 - 1p32.2 [CytoView hg38]
Mapping of homologs : NCBILINC01753 [Mapview hg19]  LINC01753 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX111514
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01753
Cluster EST : UnigeneHs.98895 [ NCBI ]
CGAP (NCI)Hs.98895
Alternative Splicing GalleryENSG00000230250
Gene ExpressionLINC01753 [ NCBI-GEO ]   LINC01753 [ EBI - ARRAY_EXPRESS ]   LINC01753 [ SEEK ]   LINC01753 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01753 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105378739
GTEX Portal (Tissue expression)LINC01753
Human Protein AtlasENSG00000230250-LINC01753 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01753
DMDM Disease mutations105378739
Blocks (Seattle)LINC01753
Human Protein Atlas [tissue]ENSG00000230250-LINC01753 [tissue]
Protein Interaction databases
FunCoupENSG00000230250
BioGRIDLINC01753
STRING (EMBL)LINC01753
ZODIACLINC01753
Ontologies - Pathways
Huge Navigator LINC01753 [HugePedia]
snp3D : Map Gene to Disease105378739
BioCentury BCIQLINC01753
ClinGenLINC01753
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105378739
Clinical trialLINC01753
Miscellaneous
canSAR (ICR)LINC01753 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01753
EVEXLINC01753
GoPubMedLINC01753
iHOPLINC01753
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:11 CET 2017

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