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LINC01757 (long intergenic non-protein coding RNA 1757)

Identity

Other alias-
HGNC (Hugo) LINC01757
LocusID (NCBI) 105376827
Atlas_Id 79525
Location 1p36.12  [Link to chromosome band 1p36]
Location_base_pair Starts at 20243095 and ends at 20244654 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01757   52546
Cards
Entrez_Gene (NCBI)LINC01757  105376827  long intergenic non-protein coding RNA 1757
Aliases
GeneCards (Weizmann)LINC01757
Ensembl hg19 (Hinxton)ENSG00000228105 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228105 [Gene_View]  chr1:20243095-20244654 [Contig_View]  LINC01757 [Vega]
ICGC DataPortalENSG00000228105
TCGA cBioPortalLINC01757
AceView (NCBI)LINC01757
Genatlas (Paris)LINC01757
WikiGenes105376827
SOURCE (Princeton)LINC01757
Genetics Home Reference (NIH)LINC01757
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01757  -     chr1:20243095-20244654 +  1p36.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01757  -     1p36.12   [Description]    (hg19-Feb_2009)
EnsemblLINC01757 - 1p36.12 [CytoView hg19]  LINC01757 - 1p36.12 [CytoView hg38]
Mapping of homologs : NCBILINC01757 [Mapview hg19]  LINC01757 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX094500
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01757
Cluster EST : UnigeneHs.559701 [ NCBI ]
CGAP (NCI)Hs.559701
Alternative Splicing GalleryENSG00000228105
Gene ExpressionLINC01757 [ NCBI-GEO ]   LINC01757 [ EBI - ARRAY_EXPRESS ]   LINC01757 [ SEEK ]   LINC01757 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01757 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105376827
GTEX Portal (Tissue expression)LINC01757
Human Protein AtlasENSG00000228105-LINC01757 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01757
DMDM Disease mutations105376827
Blocks (Seattle)LINC01757
Human Protein Atlas [tissue]ENSG00000228105-LINC01757 [tissue]
Protein Interaction databases
FunCoupENSG00000228105
BioGRIDLINC01757
STRING (EMBL)LINC01757
ZODIACLINC01757
Ontologies - Pathways
Huge Navigator LINC01757 [HugePedia]
snp3D : Map Gene to Disease105376827
BioCentury BCIQLINC01757
ClinGenLINC01757
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105376827
Clinical trialLINC01757
Miscellaneous
canSAR (ICR)LINC01757 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01757
EVEXLINC01757
GoPubMedLINC01757
iHOPLINC01757
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:12 CET 2017

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