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LINC01762 (long intergenic non-protein coding RNA 1762)

Identity

Other alias-
HGNC (Hugo) LINC01762
LocusID (NCBI) 101929023
Atlas_Id 80257
Location 1p13.1  [Link to chromosome band 1p13]
Location_base_pair Starts at 116423724 and ends at 116478826 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01762   52552
Cards
Entrez_Gene (NCBI)LINC01762  101929023  long intergenic non-protein coding RNA 1762
Aliases
GeneCards (Weizmann)LINC01762
Ensembl hg19 (Hinxton)ENSG00000233154 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233154 [Gene_View]  chr1:116423724-116478826 [Contig_View]  LINC01762 [Vega]
ICGC DataPortalENSG00000233154
TCGA cBioPortalLINC01762
AceView (NCBI)LINC01762
Genatlas (Paris)LINC01762
WikiGenes101929023
SOURCE (Princeton)LINC01762
Genetics Home Reference (NIH)LINC01762
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01762  -     chr1:116423724-116478826 -  1p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01762  -     1p13.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01762 - 1p13.1 [CytoView hg19]  LINC01762 - 1p13.1 [CytoView hg38]
Mapping of homologs : NCBILINC01762 [Mapview hg19]  LINC01762 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI373223 AI672558 BX097658
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01762
Cluster EST : UnigeneHs.668091 [ NCBI ]
CGAP (NCI)Hs.668091
Alternative Splicing GalleryENSG00000233154
Gene ExpressionLINC01762 [ NCBI-GEO ]   LINC01762 [ EBI - ARRAY_EXPRESS ]   LINC01762 [ SEEK ]   LINC01762 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01762 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929023
GTEX Portal (Tissue expression)LINC01762
Human Protein AtlasENSG00000233154-LINC01762 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01762
DMDM Disease mutations101929023
Blocks (Seattle)LINC01762
Human Protein Atlas [tissue]ENSG00000233154-LINC01762 [tissue]
Protein Interaction databases
FunCoupENSG00000233154
BioGRIDLINC01762
STRING (EMBL)LINC01762
ZODIACLINC01762
Ontologies - Pathways
Huge Navigator LINC01762 [HugePedia]
snp3D : Map Gene to Disease101929023
BioCentury BCIQLINC01762
ClinGenLINC01762
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929023
Clinical trialLINC01762
Miscellaneous
canSAR (ICR)LINC01762 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01762
EVEXLINC01762
GoPubMedLINC01762
iHOPLINC01762
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:13 CET 2017

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