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LINC01767 (long intergenic non-protein coding RNA 1767)

Identity

Other alias-
HGNC (Hugo) LINC01767
LocusID (NCBI) 105378744
Atlas_Id 79849
Location 1p32.2  [Link to chromosome band 1p32]
Location_base_pair Starts at 56414963 and ends at 56415966 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01767   52557
Cards
Entrez_Gene (NCBI)LINC01767  105378744  long intergenic non-protein coding RNA 1767
Aliases
GeneCards (Weizmann)LINC01767
Ensembl hg19 (Hinxton)ENSG00000223956 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223956 [Gene_View]  chr1:56414963-56415966 [Contig_View]  LINC01767 [Vega]
ICGC DataPortalENSG00000223956
TCGA cBioPortalLINC01767
AceView (NCBI)LINC01767
Genatlas (Paris)LINC01767
WikiGenes105378744
SOURCE (Princeton)LINC01767
Genetics Home Reference (NIH)LINC01767
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01767  -     chr1:56414963-56415966 +  1p32.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01767  -     1p32.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01767 - 1p32.2 [CytoView hg19]  LINC01767 - 1p32.2 [CytoView hg38]
Mapping of homologs : NCBILINC01767 [Mapview hg19]  LINC01767 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX105201
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01767
Cluster EST : UnigeneHs.183974 [ NCBI ]
CGAP (NCI)Hs.183974
Alternative Splicing GalleryENSG00000223956
Gene ExpressionLINC01767 [ NCBI-GEO ]   LINC01767 [ EBI - ARRAY_EXPRESS ]   LINC01767 [ SEEK ]   LINC01767 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01767 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105378744
GTEX Portal (Tissue expression)LINC01767
Human Protein AtlasENSG00000223956-LINC01767 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01767
DMDM Disease mutations105378744
Blocks (Seattle)LINC01767
Human Protein Atlas [tissue]ENSG00000223956-LINC01767 [tissue]
Protein Interaction databases
FunCoupENSG00000223956
BioGRIDLINC01767
STRING (EMBL)LINC01767
ZODIACLINC01767
Ontologies - Pathways
Huge Navigator LINC01767 [HugePedia]
snp3D : Map Gene to Disease105378744
BioCentury BCIQLINC01767
ClinGenLINC01767
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105378744
Clinical trialLINC01767
Miscellaneous
canSAR (ICR)LINC01767 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01767
EVEXLINC01767
GoPubMedLINC01767
iHOPLINC01767
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:40:07 CET 2017

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