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LINC01770 (long intergenic non-protein coding RNA 1770)

Identity

Other alias-
HGNC (Hugo) LINC01770
LocusID (NCBI) 102724312
Atlas_Id 79325
Location 1p36.33  [Link to chromosome band 1p36]
Location_base_pair Starts at 1430157 and ends at 1434573 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01770   52560
Cards
Entrez_Gene (NCBI)LINC01770  102724312  long intergenic non-protein coding RNA 1770
Aliases
GeneCards (Weizmann)LINC01770
Ensembl hg19 (Hinxton)ENSG00000225285 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225285 [Gene_View]  chr1:1430157-1434573 [Contig_View]  LINC01770 [Vega]
ICGC DataPortalENSG00000225285
TCGA cBioPortalLINC01770
AceView (NCBI)LINC01770
Genatlas (Paris)LINC01770
WikiGenes102724312
SOURCE (Princeton)LINC01770
Genetics Home Reference (NIH)LINC01770
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01770  -     chr1:1430157-1434573 -  1p36.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01770  -     1p36.33   [Description]    (hg19-Feb_2009)
EnsemblLINC01770 - 1p36.33 [CytoView hg19]  LINC01770 - 1p36.33 [CytoView hg38]
Mapping of homologs : NCBILINC01770 [Mapview hg19]  LINC01770 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI676159 BM699504 BM726062
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01770
Alternative Splicing GalleryENSG00000225285
Gene ExpressionLINC01770 [ NCBI-GEO ]   LINC01770 [ EBI - ARRAY_EXPRESS ]   LINC01770 [ SEEK ]   LINC01770 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01770 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102724312
GTEX Portal (Tissue expression)LINC01770
Human Protein AtlasENSG00000225285-LINC01770 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01770
DMDM Disease mutations102724312
Blocks (Seattle)LINC01770
Human Protein Atlas [tissue]ENSG00000225285-LINC01770 [tissue]
Protein Interaction databases
FunCoupENSG00000225285
BioGRIDLINC01770
STRING (EMBL)LINC01770
ZODIACLINC01770
Ontologies - Pathways
Huge Navigator LINC01770 [HugePedia]
snp3D : Map Gene to Disease102724312
BioCentury BCIQLINC01770
ClinGenLINC01770
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102724312
Clinical trialLINC01770
Miscellaneous
canSAR (ICR)LINC01770 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01770
EVEXLINC01770
GoPubMedLINC01770
iHOPLINC01770
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Nov 21 13:01:14 CET 2017

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