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LINC01774 (long intergenic non-protein coding RNA 1774)

Identity

Other alias-
HGNC (Hugo) LINC01774
LocusID (NCBI) 105372894
Atlas_Id 79194
Location 1q32.2  [Link to chromosome band 1q32]
Location_base_pair Starts at 208972454 and ends at 208975307 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01774   52564
Cards
Entrez_Gene (NCBI)LINC01774  105372894  long intergenic non-protein coding RNA 1774
Aliases
GeneCards (Weizmann)LINC01774
Ensembl hg19 (Hinxton)ENSG00000236950 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236950 [Gene_View]  chr1:208972454-208975307 [Contig_View]  LINC01774 [Vega]
ICGC DataPortalENSG00000236950
TCGA cBioPortalLINC01774
AceView (NCBI)LINC01774
Genatlas (Paris)LINC01774
WikiGenes105372894
SOURCE (Princeton)LINC01774
Genetics Home Reference (NIH)LINC01774
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01774  -     chr1:208972454-208975307 +  1q32.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01774  -     1q32.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01774 - 1q32.2 [CytoView hg19]  LINC01774 - 1q32.2 [CytoView hg38]
Mapping of homologs : NCBILINC01774 [Mapview hg19]  LINC01774 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA430273 BX091468
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01774
Cluster EST : UnigeneHs.98665 [ NCBI ]
CGAP (NCI)Hs.98665
Alternative Splicing GalleryENSG00000236950
Gene ExpressionLINC01774 [ NCBI-GEO ]   LINC01774 [ EBI - ARRAY_EXPRESS ]   LINC01774 [ SEEK ]   LINC01774 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01774 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105372894
GTEX Portal (Tissue expression)LINC01774
Human Protein AtlasENSG00000236950-LINC01774 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01774
DMDM Disease mutations105372894
Blocks (Seattle)LINC01774
Human Protein Atlas [tissue]ENSG00000236950-LINC01774 [tissue]
Protein Interaction databases
FunCoupENSG00000236950
BioGRIDLINC01774
STRING (EMBL)LINC01774
ZODIACLINC01774
Ontologies - Pathways
Huge Navigator LINC01774 [HugePedia]
snp3D : Map Gene to Disease105372894
BioCentury BCIQLINC01774
ClinGenLINC01774
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105372894
Clinical trialLINC01774
Miscellaneous
canSAR (ICR)LINC01774 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01774
EVEXLINC01774
GoPubMedLINC01774
iHOPLINC01774
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:14 CET 2017

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