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LINC01776 (long intergenic non-protein coding RNA 1776)

Identity

Other alias-
HGNC (Hugo) LINC01776
LocusID (NCBI) 729987
Atlas_Id 80126
Location 1p21.3  [Link to chromosome band 1p21]
Location_base_pair Starts at 98210711 and ends at 98272658 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01776   52566
Cards
Entrez_Gene (NCBI)LINC01776  729987  long intergenic non-protein coding RNA 1776
Aliases
GeneCards (Weizmann)LINC01776
Ensembl hg19 (Hinxton)ENSG00000226053 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226053 [Gene_View]  chr1:98210711-98272658 [Contig_View]  LINC01776 [Vega]
ICGC DataPortalENSG00000226053
TCGA cBioPortalLINC01776
AceView (NCBI)LINC01776
Genatlas (Paris)LINC01776
WikiGenes729987
SOURCE (Princeton)LINC01776
Genetics Home Reference (NIH)LINC01776
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01776  -     chr1:98210711-98272658 +  1p21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01776  -     1p21.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01776 - 1p21.3 [CytoView hg19]  LINC01776 - 1p21.3 [CytoView hg38]
Mapping of homologs : NCBILINC01776 [Mapview hg19]  LINC01776 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK090562
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01776
Cluster EST : UnigeneHs.683961 [ NCBI ]
CGAP (NCI)Hs.683961
Alternative Splicing GalleryENSG00000226053
Gene ExpressionLINC01776 [ NCBI-GEO ]   LINC01776 [ EBI - ARRAY_EXPRESS ]   LINC01776 [ SEEK ]   LINC01776 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01776 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)729987
GTEX Portal (Tissue expression)LINC01776
Human Protein AtlasENSG00000226053-LINC01776 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01776
DMDM Disease mutations729987
Blocks (Seattle)LINC01776
Human Protein Atlas [tissue]ENSG00000226053-LINC01776 [tissue]
IPIIPI00929515   
Protein Interaction databases
FunCoupENSG00000226053
BioGRIDLINC01776
STRING (EMBL)LINC01776
ZODIACLINC01776
Ontologies - Pathways
Huge Navigator LINC01776 [HugePedia]
snp3D : Map Gene to Disease729987
BioCentury BCIQLINC01776
ClinGenLINC01776
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729987
Clinical trialLINC01776
Miscellaneous
canSAR (ICR)LINC01776 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01776
EVEXLINC01776
GoPubMedLINC01776
iHOPLINC01776
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:40:09 CET 2017

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