Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01781 (long intergenic non-protein coding RNA 1781)

Identity

Other alias-
HGNC (Hugo) LINC01781
LocusID (NCBI) 101927412
Atlas_Id 79866
Location 1p31.1  [Link to chromosome band 1p31]
Location_base_pair Starts at 80535755 and ends at 80646788 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01781   52571
Cards
Entrez_Gene (NCBI)LINC01781  101927412  long intergenic non-protein coding RNA 1781
Aliases
GeneCards (Weizmann)LINC01781
Ensembl hg19 (Hinxton)ENSG00000234184 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234184 [Gene_View]  chr1:80535755-80646788 [Contig_View]  LINC01781 [Vega]
ICGC DataPortalENSG00000234184
TCGA cBioPortalLINC01781
AceView (NCBI)LINC01781
Genatlas (Paris)LINC01781
WikiGenes101927412
SOURCE (Princeton)LINC01781
Genetics Home Reference (NIH)LINC01781
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01781  -     chr1:80535755-80646788 +  1p31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01781  -     1p31.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01781 - 1p31.1 [CytoView hg19]  LINC01781 - 1p31.1 [CytoView hg38]
Mapping of homologs : NCBILINC01781 [Mapview hg19]  LINC01781 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW611782 BE466477 BF175091 BU531772
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01781
Cluster EST : UnigeneHs.636586 [ NCBI ]
CGAP (NCI)Hs.636586
Alternative Splicing GalleryENSG00000234184
Gene ExpressionLINC01781 [ NCBI-GEO ]   LINC01781 [ EBI - ARRAY_EXPRESS ]   LINC01781 [ SEEK ]   LINC01781 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01781 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927412
GTEX Portal (Tissue expression)LINC01781
Human Protein AtlasENSG00000234184-LINC01781 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01781
DMDM Disease mutations101927412
Blocks (Seattle)LINC01781
Human Protein Atlas [tissue]ENSG00000234184-LINC01781 [tissue]
Protein Interaction databases
FunCoupENSG00000234184
BioGRIDLINC01781
STRING (EMBL)LINC01781
ZODIACLINC01781
Ontologies - Pathways
Huge Navigator LINC01781 [HugePedia]
snp3D : Map Gene to Disease101927412
BioCentury BCIQLINC01781
ClinGenLINC01781
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927412
Clinical trialLINC01781
Miscellaneous
canSAR (ICR)LINC01781 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01781
EVEXLINC01781
GoPubMedLINC01781
iHOPLINC01781
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:40:10 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.